RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 IER2Q9BTL4 223 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 TRPV4Q9HBA0 871 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 STEAP1Q9UHE8 339 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 NOP16Q9Y3C1 178 aaKnown RBP10.7□□□□□ -0.7
HDAC4-210ENST00000493582 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
HDAC4-210ENST00000493582 SCN10AQ9Y5Y9 1956 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 A0A1B0GVT2 93 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 C4orf51C9J302 202 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 EMC8O43402 210 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 DUSP11O75319 330 aaKnown RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 RNF224P0DH78 156 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 PRF1P14222 555 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 TIMP2P16035 220 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 AQP2P41181 271 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 DHRS2Q13268 280 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 NR0B2Q15466 257 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 PRAMEF8Q5VWM4 474 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 PRAMEF7Q5VXH5 474 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ASTLQ6HA08 431 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ENPP7Q6UWV6 458 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 BIVMQ86UB2 503 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF547Q8IVP9 402 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 OR4K14Q8NGD5 310 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 OR51D1Q8NGF3 324 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 COL26A1Q96A83 441 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 HRH4Q9H3N8 390 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 WDR45Q9Y484 360 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 NPIPA5A0A0B4J1W7 369 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 GGT3PA6NGU5 568 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 FAM171A2A8MVW0 826 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 PRR32B1ATL7 298 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 NPIPA7E9PJI5 369 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ITGB2P05107 769 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ASGR1P07306 291 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 NPIPA8P0DM63 369 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 HIST1H1CP16403 213 aaKnown RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ELAVL1Q15717 326 aaKnown RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 ODF4Q2M2E3 257 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 SLC29A4Q7RTT9 530 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 PCSK9Q8NBP7 692 aaKnown RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 SLC2A12Q8TD20 617 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 GRHL3Q8TE85 626 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 C3orf49Q96BT1 292 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 MYADMQ96S97 322 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 SELENOIQ9C0D9 397 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 LAT2Q9GZY6 243 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 TAS2R8Q9NYW2 309 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 PCYT1BQ9Y5K3 369 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 A0A1B0GTH9 108 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 LILRB5O75023 590 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 CLN5O75503 358 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 KLK3P07288 261 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 CD79AP11912 226 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 NQO2P16083 231 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 EPCAMP16422 314 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 DDX6P26196 483 aaKnown RBP eCLIP10.69□□□□□ -0.72e-8■■■■■ 260
HDAC4-210ENST00000493582 EPHB3P54753 998 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 POU4F2Q12837 409 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 SLC9A5Q14940 896 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 NKAIN2Q5VXU1 208 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 DCUN1D3Q8IWE4 304 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 INO80EQ8NBZ0 244 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 OR6K6Q8NGW6 343 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 C15orf40Q8WUR7 153 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 TRIM43Q96BQ3 446 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 Q96M85 177 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 MAP3K3Q99759 626 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 RSPH9Q9H1X1 276 aaPredicted RBP10.69□□□□□ -0.7
HDAC4-210ENST00000493582 CALML5Q9NZT1 146 aa10.69□□□□□ -0.7
HDAC4-210ENST00000493582 TRAV8-7A0A075B6U6 113 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 LOC100509620A0A075B734 347 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 A0A1B0GTI1 187 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 TSPAN11A1L157 253 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 GPRIN2O60269 458 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 CSN2P05814 226 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ELFN1P0C7U0 828 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 PGAM2P15259 253 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 MUC1P15941 1255 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 CD34P28906 385 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 F2RL1P55085 397 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 OR2B11Q5JQS5 317 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 NKAPLQ5M9Q1 402 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 TMEM200AQ86VY9 491 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 CLEC1AQ8NC01 280 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 CD99L2Q8TCZ2 262 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 SFXN5Q8TD22 340 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 CCDC107Q8WV48 283 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ZC3H10Q96K80 434 aaKnown RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 PFDN5Q99471 154 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 NRIP2Q9BQI9 281 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ALX4Q9H161 411 aaPredicted RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 C1orf198Q9H425 327 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 DZANK1Q9NVP4 752 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 RCC2Q9P258 522 aaKnown RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 TBC1D3EA0A087X179 549 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 A0A0B4J2A0 478 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 ERI3O43414 337 aaKnown RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 AIFM1O95831 613 aa10.68□□□□□ -0.7
HDAC4-210ENST00000493582 HLA-AP01891 365 aaKnown RBP10.68□□□□□ -0.7
HDAC4-210ENST00000493582 FBP1P09467 338 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms