RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TLDC2A0PJX2 215 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 M0R3G1 203 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 TRAF3IP2O43734 574 aaPredicted RBP15.13■□□□□ 0.01
NUP50-218ENST00000493456 OR2T1O43869 369 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 MPZL1O95297 269 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 KRT75O95678 551 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 MYZAPP0CAP1 466 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 PRG2P13727 222 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 FOXL1Q12952 345 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 MAD2L1BPQ15013 274 aaPredicted RBP15.13■□□□□ 0.01
NUP50-218ENST00000493456 CHI3L2Q15782 390 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 ZNF621Q6ZSS3 439 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 SERPINA11Q86U17 422 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 LRP11Q86VZ4 500 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 ZNF781Q8N8C0 355 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 KIF18AQ8NI77 898 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 NANPQ8TBE9 248 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 PNPT1Q8TCS8 783 aaKnown RBP15.13■□□□□ 0.01
NUP50-218ENST00000493456 KTI12Q96EK9 354 aaPredicted RBP15.13■□□□□ 0.01
NUP50-218ENST00000493456 LRR1Q96L50 414 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 TMPRSS13Q9BYE2 586 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 ESM1Q9NQ30 184 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 MYEF2Q9P2K5 600 aaKnown RBP15.13■□□□□ 0.01
NUP50-218ENST00000493456 SEC14L4Q9UDX3 406 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 SLC7A8Q9UHI5 535 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 ZNF232Q9UNY5 417 aa15.13■□□□□ 0.01
NUP50-218ENST00000493456 M0R082 166 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 RAB36O95755 333 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 NAT2P11245 290 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 LBPP18428 481 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 GATA3P23771 443 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 LSP1P33241 339 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 CDKN2CP42773 168 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 PTDSS1P48651 473 aaKnown RBP15.12■□□□□ 0.01
NUP50-218ENST00000493456 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
NUP50-218ENST00000493456 GLIPR1L2Q4G1C9 344 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 FAM69AQ5T7M9 428 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 C6orf89Q6UWU4 347 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 ZNF813Q6ZN06 617 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 H1FNTQ75WM6 255 aaPredicted RBP15.12■□□□□ 0.01
NUP50-218ENST00000493456 C20orf196Q8IYI0 205 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 KIRREL3Q8IZU9 778 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 CLIP4Q8N3C7 705 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 ZDHHC22Q8N966 263 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 ADPRHL1Q8NDY3 354 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 ZNF417Q8TAU3 575 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 SLC35B4Q969S0 331 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 ZNF587Q96SQ5 575 aaPredicted RBP15.12■□□□□ 0.01
NUP50-218ENST00000493456 SPATA9Q9BWV2 254 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 C12orf10Q9HB07 376 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 NTN4Q9HB63 628 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 B3GAT2Q9NPZ5 323 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 GPR160Q9UJ42 338 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 FZR1Q9UM11 496 aa15.12■□□□□ 0.01
NUP50-218ENST00000493456 BCHEP06276 602 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 HKR1P10072 659 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 SELENOVP59797 346 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 PIGFQ07326 219 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 NKPD1Q17RQ9 610 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 PCGF3Q3KNV8 242 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 PHYHD1Q5SRE7 291 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 DCAF12L2Q5VW00 463 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 NET1Q7Z628 596 aaPredicted RBP15.11■□□□□ 0.01
NUP50-218ENST00000493456 NUDCD3Q8IVD9 361 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 UEVLDQ8IX04 471 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 SLC38A4Q969I6 547 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 TEX37Q96LM6 180 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 OR52E6Q96RD3 313 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 DDX28Q9NUL7 540 aaKnown RBP15.11■□□□□ 0.01
NUP50-218ENST00000493456 LGALS13Q9UHV8 139 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 DUSP13Q9UII6 198 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 POFUT2Q9Y2G5 429 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 IFT52Q9Y366 437 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 CHST2Q9Y4C5 530 aa15.11■□□□□ 0.01
NUP50-218ENST00000493456 PLPP2O43688 288 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 ITM2AO43736 263 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 DEAF1O75398 565 aaPredicted RBP15.1■□□□□ 0.01
NUP50-218ENST00000493456 UBL3O95164 117 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 GRPRP30550 384 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 ETV4P43268 484 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 GIPRP48546 466 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 RAB1AP62820 205 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 TEKQ02763 1124 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 MFSD13AQ14CX5 517 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 CARD17Q5XLA6 110 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 OGFOD2Q6N063 350 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 SLC38A5Q8WUX1 472 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 THUMPD1Q9NXG2 353 aaKnown RBP15.1■□□□□ 0.01
NUP50-218ENST00000493456 ZNF224Q9NZL3 707 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 RPS6KB2Q9UBS0 482 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.1■□□□□ 0.01
NUP50-218ENST00000493456 RAP2CQ9Y3L5 183 aa15.1■□□□□ 0.01
NUP50-218ENST00000493456 PRKDCP78527 4128 aaKnown RBP15.1■□□□□ 0.01
NUP50-218ENST00000493456 TRAV36DV7A0A075B6V5 113 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 A0A0G2JPF8 293 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 TMEM247A6NEH6 219 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 C17orf100A8MU93 164 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 HNRNPCL2B2RXH8 293 aa15.09■□□□□ 0.01
NUP50-218ENST00000493456 HNRNPCL3B7ZW38 293 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms