RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 EVPLLA8MZ36 301 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 M0R3G1 203 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SEC14L2O76054 403 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 LYPD3O95274 346 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 THBS4P35443 961 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SNRPD2P62316 118 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CHRFAM7AQ494W8 412 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 VHLLQ6RSH7 139 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MDP1Q86V88 176 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TSPYL5Q86VY4 417 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 DPP10Q8N608 796 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SCAIQ8N9R8 606 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 BHLHE22Q8NFJ8 381 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 OR4F15Q8NGB8 312 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CKAP2Q8WWK9 683 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 LRR1Q96L50 414 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ANKRD27Q96NW4 1050 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 FOXN4Q96NZ1 517 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 KCNS3Q9BQ31 491 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TMEM43Q9BTV4 400 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NOX3Q9HBY0 568 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MOV10Q9HCE1 1003 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 TMEM160Q9NX00 188 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MED29Q9NX70 200 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CORINQ9Y5Q5 1042 aa16.81■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SLC35F4A4IF30 521 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 M0R3H8 397 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PLPP3O14495 311 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SERPINB7O75635 380 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NR4A2P43354 598 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PDLIM4P50479 330 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 IDH3GP51553 393 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 LSM11P83369 360 aaKnown RBP eCLIP16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MFSD13AQ14CX5 517 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CARD17Q5XLA6 110 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CYB5R2Q6BCY4 276 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PODNL1Q6PEZ8 512 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 WDR88Q6ZMY6 472 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF627Q7L945 461 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 UEVLDQ8IX04 471 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 OR4D11Q8NGI4 311 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 DOK1Q99704 481 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 VRK1Q99986 396 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF442Q9H7R0 627 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MRPL39Q9NYK5 338 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF224Q9NZL3 707 aa16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 LEF1Q9UJU2 399 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1B-202ENST00000489921 IGHV4-61A0A0C4DH41 118 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 M0QX08 132 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NDUFS8O00217 210 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 FMO6PO60774 539 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 OPN1SWP03999 348 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NQO1P15559 274 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF16P17020 682 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ARR3P36575 388 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PPOXP50336 477 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MTPNP58546 118 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 IL1RL1Q01638 556 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 POU3F1Q03052 451 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MSMPQ1L6U9 139 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SWT1Q5T5J6 900 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RBM45Q8IUH3 476 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZCCHC24Q8N2G6 241 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ARIH2OSQ8N7S6 290 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 OR6T1Q8NGN1 323 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RNF217Q8TC41 542 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 KCNK17Q96T54 332 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 EPYCQ99645 322 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CGREF1Q99674 301 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MCHR1Q99705 422 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 KAT8Q9H7Z6 458 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 EVA1AQ9H8M9 152 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CDC42EP3Q9UKI2 254 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 FKBP7Q9Y680 259 aa16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.79■□□□□ 0.28
TNFRSF1B-202ENST00000489921 LOC390937A0A1W2PQ73 354 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 HLA-HP01893 362 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 C8BP07358 591 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 FAM157CP0CG43 387 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 GZMMP51124 257 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CRYBA2P53672 197 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 NCALDP61601 193 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PUDPQ08623 228 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RBBP4Q09028 425 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PMS2P3Q13401 168 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ZNF613Q6PF04 617 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 SLC46A3Q7Z3Q1 461 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 PXKQ7Z7A4 578 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 DHDDSQ86SQ9 333 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RANBP3LQ86VV4 465 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 CCDC36Q8IYA8 594 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 C11orf65Q8NCR3 313 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 DYDC1Q8WWB3 177 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MS4A3Q96HJ5 214 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 MAGEB18Q96M61 343 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ASPNQ9BXN1 380 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 RABEP2Q9H5N1 569 aa16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 INTS9Q9NV88 658 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1B-202ENST00000489921 ANGPT4Q9Y264 503 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms