RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 ZMYND11Q15326 602 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 GPR68Q15743 365 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 MOGQ16653 247 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 FAM83EQ2M2I3 478 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 FAM209AQ5JX71 171 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 NKAPLQ5M9Q1 402 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 SPDYAQ5MJ70 313 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 EXOSC6Q5RKV6 272 aaKnown RBP10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 DDIASQ8IXT1 998 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 CPEB3Q8NE35 698 aaKnown RBP10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 WFDC9Q8NEX5 89 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 PMM1Q92871 262 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 ZG16BQ96DA0 208 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 CCDC126Q96EE4 140 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 THOC1Q96FV9 657 aaKnown RBP10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 STACQ99469 402 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 TRIM15Q9C019 465 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 IQCGQ9H095 443 aaKnown RBP10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 PPA2Q9H2U2 334 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 ADPRHL2Q9NX46 363 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 KCNE5Q9UJ90 142 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 ZNF225Q9UK10 706 aa10.11□□□□□ -0.79
ATPAF1-205ENST00000487193 STARD9Q9P2P6 4700 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 ZNF99A8MXY4 864 aaPredicted RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 BCAS1O75363 584 aaPredicted RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 KRT6AP02538 564 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 KRT6BP04259 564 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 GPIP06744 558 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 CHRM4P08173 479 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 CD28P10747 220 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 SPRP35270 261 aaPredicted RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 KRT6CP48668 564 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 IDH2P48735 452 aaKnown RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 EFNB2P52799 333 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 AQP5P55064 265 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 BTG1P62324 171 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 RBBP4Q09028 425 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 PDIA2Q13087 525 aaKnown RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 ARHGAP11BQ3KRB8 267 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 OLIG3Q7RTU3 272 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 LDLRAD3Q86YD5 345 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 KDM8Q8N371 416 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 PAQR4Q8N4S7 273 aaPredicted RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 SCCPDHQ8NBX0 429 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 ZNF519Q8TB69 540 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 MS4A14Q96JA4 679 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 TMEM106BQ9NUM4 274 aa10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 POLR3HQ9Y535 204 aaPredicted RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 HUWE1Q7Z6Z7 4374 aaKnown RBP10.1□□□□□ -0.79
ATPAF1-205ENST00000487193 LIPT2A6NK58 231 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 CEACAM18A8MTB9 384 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 PATE4P0C8F1 98 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 HTR6P50406 440 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 ARL4CP56559 192 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 CAMK2DQ13557 499 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 ZNF813Q6ZN06 617 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 EIF3MQ7L2H7 374 aaKnown RBP10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 VASH1Q7L8A9 365 aaPredicted RBP10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 FITM2Q8N6M3 262 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 ZFP28Q8NHY6 868 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 GRK7Q8WTQ7 553 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 CDKL2Q92772 493 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 DACT3Q96B18 629 aaPredicted RBP10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 EGLN2Q96KS0 407 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 ACTRT3Q9BYD9 372 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 ZCCHC3Q9NUD5 404 aaKnown RBP10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 KIF17Q9P2E2 1029 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 OSGIN1Q9UJX0 560 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
ATPAF1-205ENST00000487193 STAB2Q8WWQ8 2551 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 BTBD17A6NE02 478 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 RNASEK-C17orf49H0YIS7 233 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 M0R3G1 203 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 ZNF208O43345 1280 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 FBXO24O75426 580 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 RPS2P15880 293 aaKnown RBP10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 SSTR1P30872 391 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 P2RY4P51582 365 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 DCTN2Q13561 401 aaKnown RBP10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 ZNF385BQ569K4 471 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 PHYHD1Q5SRE7 291 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 GRTP1Q5TC63 336 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 ZNF774Q6NX45 483 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 KLC3Q6P597 504 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 ZNF584Q8IVC4 421 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 CTAGE3PQ8IX95 158 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 PDZD9Q8IXQ8 264 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 Q8NFD4 153 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 FAM120BQ96EK7 910 aaKnown RBP10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 PRPF18Q99633 342 aaKnown RBP10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 EXD2Q9NVH0 621 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 ZNF224Q9NZL3 707 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 FAM96BQ9Y3D0 163 aa10.08□□□□□ -0.8
ATPAF1-205ENST00000487193 IGHV1-69DA0A0B4J2H0 117 aa10.07□□□□□ -0.8
ATPAF1-205ENST00000487193 PLSCR5A0PG75 271 aa10.07□□□□□ -0.8
ATPAF1-205ENST00000487193 ZSCAN5BA6NJL1 495 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms