RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PAGE3Q5JUK9 113 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 SWT1Q5T5J6 900 aaKnown RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 UEVLDQ8IX04 471 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 C10orf111Q8N326 155 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 TMEM43Q9BTV4 400 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 DENND2DQ9H6A0 471 aaPredicted RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 CRLF2Q9HC73 371 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 MRPL39Q9NYK5 338 aaKnown RBP9.93□□□□□ -0.82
SCFD1-206ENST00000484733 SELENONQ9NZV5 590 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 VAPAQ9P0L0 249 aa9.93□□□□□ -0.82
SCFD1-206ENST00000484733 SONP18583 2426 aaKnown RBP9.92□□□□□ -0.82
SCFD1-206ENST00000484733 IGHV4-61A0A0C4DH41 118 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 hCG_2039718K7EN88 272 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 FMO6PO60774 539 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 SERPINB7O75635 380 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 HPRP00739 348 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 EVX1P49640 407 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 SCARB2Q14108 478 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 GGTLC2Q14390 218 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 ADRM1Q16186 407 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 GLIPR1L2Q4G1C9 344 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 PHYHD1Q5SRE7 291 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 MDP1Q86V88 176 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 ANKS4BQ8N8V4 417 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 HIPK4Q8NE63 616 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-206ENST00000484733 ASPNQ9BXN1 380 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 B3GAT2Q9NPZ5 323 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 NOX1Q9Y5S8 564 aa9.92□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF503-AS2A6NEH8 195 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 EVPLLA8MZ36 301 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 ERCC1P07992 297 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-206ENST00000484733 CELA3BP08861 270 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 SLC6A2P23975 617 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 IGFBP5P24593 272 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 NCALDP61601 193 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 VHLLQ6RSH7 139 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 LINC00114Q6XXX2 140 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 MYPOPQ86VE0 399 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-206ENST00000484733 SNX32Q86XE0 403 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 LRRC8CQ8TDW0 803 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 HPS1Q92902 700 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 MSI2Q96DH6 328 aaKnown RBP9.91□□□□□ -0.82
SCFD1-206ENST00000484733 C1orf159Q96HA4 380 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF75AQ96N20 296 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 CPPED1Q9BRF8 314 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-206ENST00000484733 CCDC167Q9P0B6 97 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 LOC100289279A0A1B0GTE1 492 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 TPST2O60704 377 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 MFN2O95140 757 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 MT-ATP6P00846 226 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 C8BP07358 591 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 TACSTD2P09758 323 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 RGS8P57771 180 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-206ENST00000484733 DAG1Q14118 895 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 SQLEQ14534 574 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 RUNDC3AQ59EK9 446 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF613Q6PF04 617 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 DLEU7Q6UYE1 221 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 PXKQ7Z7A4 578 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 RANBP3LQ86VV4 465 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-206ENST00000484733 ARHGDIGQ99819 225 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 EBF4Q9BQW3 602 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 FBXL3Q9UKT7 428 aa9.91□□□□□ -0.82
SCFD1-206ENST00000484733 SLC35F4A4IF30 521 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 PLPP3O14495 311 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 IGFBP1P08833 259 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-206ENST00000484733 HLA-DOBP13765 273 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 NR4A1P22736 598 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 PCBP3P57721 371 aaKnown RBP9.9□□□□□ -0.82
SCFD1-206ENST00000484733 RBBP4Q09028 425 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 PMS2P3Q13401 168 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 SPATA21Q7Z572 469 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 ARMC8Q8IUR7 673 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF786Q8N393 782 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 BPESC1Q9GZL8 116 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 IKZF5Q9H5V7 419 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 SLCO1B3Q9NPD5 702 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 SLC13A4Q9UKG4 626 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 ANGPT4Q9Y264 503 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 POFUT2Q9Y2G5 429 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 CMAHPQ9Y471 501 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 M0R3G1 203 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF35P13682 527 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 DAOP14920 347 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 NQO1P15559 274 aaKnown RBP9.9□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF14P17017 642 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-206ENST00000484733 SRD5A1P18405 259 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 HNF1AP20823 631 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 CBLP22681 906 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 CHN2P52757 468 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 CDH12P55289 794 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 IL1RL1Q01638 556 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 PUDPQ08623 228 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 ZP4Q12836 540 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 IQCCQ4KMZ1 466 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 AGKQ53H12 422 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 FAM120AOSQ5T036 256 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 UGT2A3Q6UWM9 527 aa9.9□□□□□ -0.82
SCFD1-206ENST00000484733 SVOPLQ8N434 492 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms