RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 DCSTAMPQ9H295 470 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 ISG20L2Q9H9L3 353 aaKnown RBP12.63□□□□□ -0.39
CLK3-204ENST00000483723 RPRD1BQ9NQG5 326 aaKnown RBP12.63□□□□□ -0.39
CLK3-204ENST00000483723 SACM1LQ9NTJ5 587 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 VSX1Q9NZR4 365 aaPredicted RBP12.63□□□□□ -0.39
CLK3-204ENST00000483723 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
CLK3-204ENST00000483723 AKAP8O43823 692 aaKnown RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 CLPXO76031 633 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 RENP00797 406 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 P04436 131 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 MRPL3P09001 348 aaKnown RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 INHBBP09529 407 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 TFPIP10646 304 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 AHCYP23526 432 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 CAPZA2P47755 286 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 CYB561P49447 251 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 PUDPQ08623 228 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 MYBPHQ13203 477 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 DGUOKQ16854 277 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 TMPRSS7Q7RTY8 843 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ZBTB46Q86UZ6 589 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ATP6V1C2Q8NEY4 427 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 OR51L1Q8NGJ5 315 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 OR2T4Q8NH00 348 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 UFD1Q92890 307 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 FER1L6-AS2Q96M78 137 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 RNF167Q9H6Y7 350 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 MARCH7Q9H992 704 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 SIAEQ9HAT2 523 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 TRAPPC4Q9Y296 219 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 MRPS18CQ9Y3D5 142 aaKnown RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 FKBP7Q9Y680 259 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 A0A1W2PNV4 684 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 A0A1W2PQL4 384 aaPredicted RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 PRSS37A4D1T9 235 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 H3BML4 177 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 DCTN6O00399 190 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 GAAP10253 952 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ZNF17P17021 662 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 PYCR1P32322 319 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ACVR1BP36896 505 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 P2RY4P51582 365 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 RPS3AP61247 264 aaKnown RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 HSF2Q03933 536 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ASCL5Q7RTU5 278 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 PXKQ7Z7A4 578 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 EGFL6Q8IUX8 553 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 SLC35F2Q8IXU6 374 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 OR6V1Q8N148 313 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 OR5M1Q8NGP8 315 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 TRMT61AQ96FX7 289 aaKnown RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 TSSK2Q96PF2 358 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 UBL7Q96S82 380 aaPredicted RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 SLIRPQ9GZT3 109 aaKnown RBP12.62□□□□□ -0.39
CLK3-204ENST00000483723 TEKT2Q9UIF3 430 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 ZMIZ1Q9ULJ6 1067 aa12.62□□□□□ -0.39
CLK3-204ENST00000483723 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 A0A1W2PRG6 482 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 G3V3Y1 287 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 MT-ND5P03915 603 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 HLA-DOBP13765 273 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 CNR1P21554 472 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 SHC1P29353 583 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 SRD5A2P31213 254 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 GABRA5P31644 462 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 CD96P40200 585 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 DNASE1L1P49184 302 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 SOX8P57073 446 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 TLE3Q04726 772 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 MOGQ16653 247 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 VASNQ6EMK4 673 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 SSX6Q7RTT6 188 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 KLBQ86Z14 1044 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 TIGD4Q8IY51 512 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 GHDCQ8N2G8 530 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 SYS1Q8N2H4 156 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 TBX5Q99593 518 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
CLK3-204ENST00000483723 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
CLK3-204ENST00000483723 ANKRD10Q9NXR5 420 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 SSR3Q9UNL2 185 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 B9D1Q9UPM9 204 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 A3GALT2U3KPV4 340 aa12.61□□□□□ -0.39
CLK3-204ENST00000483723 TRDV1A0A1B0GX56 115 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 A6NIZ1 184 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 XKRYO14609 159 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 SELENOFO60613 162 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 PLGP00747 810 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 CD53P19397 219 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 GALP22466 123 aa12.6□□□□□ -0.39
CLK3-204ENST00000483723 GTF2E2P29084 291 aaKnown RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 FGF9P31371 208 aaPredicted RBP12.6□□□□□ -0.39
CLK3-204ENST00000483723 CENPAP49450 140 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms