RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF154Q13106 437 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SYCP1Q15431 976 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF77Q15935 545 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC22A6Q4U2R8 563 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF658Q5TYW1 1059 aaPredicted RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 OLFML2AQ68BL7 652 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 VITQ6UXI7 678 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 UNC93AQ86WB7 457 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 HPS6Q86YV9 775 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 NELFCDQ8IXH7 590 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 C9orf40Q8IXQ3 194 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CLDN19Q8N6F1 224 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CSGALNACT2Q8N6G5 542 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 C15orf54Q8N8G6 183 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 TMEM105Q8N8V8 129 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 Q8N9G6 341 aaPredicted RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR5B17Q8NGF7 314 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 OR9A4Q8NGU2 314 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 M1APQ8TC57 530 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 PNPT1Q8TCS8 783 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZPLD1Q8TCW7 415 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ING5Q8WYH8 240 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 MRPS31Q92665 395 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CLDN23Q96B33 292 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 TCEAL4Q96EI5 215 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SMARCD1Q96GM5 515 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 GSDMAQ96QA5 445 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 TSG101Q99816 390 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 DPH7Q9BTV6 452 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZSCAN5AQ9BUG6 496 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 BLZF1Q9H2G9 400 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 CYP3A43Q9HB55 503 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 DPM3Q9P2X0 92 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC2A6Q9UGQ3 507 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SAMD4AQ9UPU9 718 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 L3MBTL1Q9Y468 752 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 WDR45Q9Y484 360 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 SCN8AQ9UQD0 1980 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 MYLKQ15746 1914 aa3.03□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF106Q9H2Y7 1883 aaKnown RBP3.03□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF292O60281 2723 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TRPM6Q9BX84 2022 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TRAV19A0A0A6YYK7 116 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 IGHV3-35A0A0C4DH35 117 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 MYBPHLA2RUH7 354 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 GOLGA6L4A6NEF3 574 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR6C65A6NJZ3 312 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCT8L1PA6NM43 557 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 GPR89AB7ZAQ6 455 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 K7EQM0 130 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 BTN3A3O00478 584 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CETN3O15182 167 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 KIAA0754O94854 1291 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 HLA-DRAP01903 254 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 GPR89BP0CG08 455 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 HMGA1P17096 107 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCNE1P24864 410 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 GDI1P31150 447 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 FNTAP49354 379 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CASP4P49662 377 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 IST1P53990 364 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 MYL6P60660 151 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 YWHAEP62258 255 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CXCL6P80162 114 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 SLC7A9P82251 487 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 EWSR1Q01844 656 aaKnown RBP eCLIP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 PDGFRLQ15198 375 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 ANGPT1Q15389 498 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TGIF1Q15583 401 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TIMM50Q3ZCQ8 353 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CFAP157Q5JU67 520 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 FAM78AQ5JUQ0 283 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 C1orf220Q5T0J3 134 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TTC23Q5W5X9 447 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 OR8G2PQ6IF36 304 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 UFSP1Q6NVU6 142 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 FAM71F2Q6NXP2 309 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 FAHD2BQ6P2I3 314 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 C2orf66Q6UXQ4 117 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 BAIAP2L2Q6UXY1 529 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 TMEM150AQ86TG1 271 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 RALGPS2Q86X27 583 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 NAXDQ8IW45 347 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CMTM8Q8IZV2 173 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CSNK1A1LQ8N752 337 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 SYT14Q8NB59 555 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCDC26Q8TAB7 109 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 AENQ8WTP8 325 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 OTUB2Q96DC9 234 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 FAHD2AQ96GK7 314 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 PKNOX2Q96KN3 472 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 NAP1L5Q96NT1 182 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CCT8L2Q96SF2 557 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 ZNF607Q96SK3 696 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CITED1Q99966 193 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 MRPL45Q9BRJ2 306 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 FBXO44Q9H4M3 255 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 SMYD3Q9H7B4 428 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 ELOVL3Q9HB03 270 aa3.02□□□□□ -1.93
CDC42BPA-212ENST00000478573 CSNK1G1Q9HCP0 422 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms