RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 ACTR3BQ9P1U1 418 aa12.71□□□□□ -0.37
ABCF3-211ENST00000475728 STX18Q9P2W9 335 aaKnown RBP12.71□□□□□ -0.37
ABCF3-211ENST00000475728 ABCA4P78363 2273 aa12.71□□□□□ -0.38
ABCF3-211ENST00000475728 A0A1W2PRG6 482 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 A0A1W2PRQ8 180 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 C11orf98E9PRG8 122 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 BLOC1S5-TXNDC5H3BN57 136 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 RPL36A-HNRNPH2H7BZ11 118 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 J3KTA2 159 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 FFAR1O14842 300 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 SIAH2O43255 324 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 H1F0P07305 194 aaKnown RBP12.7□□□□□ -0.38
ABCF3-211ENST00000475728 T-ENOLP0DO92 83 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 IFI30P13284 250 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-211ENST00000475728 DNASE1P24855 282 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 PRPS1P60891 318 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
ABCF3-211ENST00000475728 FOXD4Q12950 439 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-211ENST00000475728 DGCR6Q14129 220 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 SLC35D2Q76EJ3 337 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 TMEM123Q8N131 208 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 OR6N1Q8NGY5 312 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 BPIFA2Q96DR5 249 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 C7orf34Q96L11 122 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 ALKBH3Q96Q83 286 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-211ENST00000475728 NDEL1Q9GZM8 345 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 PLEKHF2Q9H8W4 249 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 KRCC1Q9NPI7 259 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-211ENST00000475728 SLC17A5Q9NRA2 495 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 MAN2C1Q9NTJ4 1040 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 TAS2R5Q9NYW4 299 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 RHCGQ9UBD6 479 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 ST6GALNAC2Q9UJ37 374 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 TMEM5Q9Y2B1 443 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 AKAP9Q99996 3911 aa12.7□□□□□ -0.38
ABCF3-211ENST00000475728 FREM1Q5H8C1 2179 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 SLC35F4A4IF30 521 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 ENTPD5O75356 428 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 UPK3AO75631 287 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 SERPINI2O75830 405 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 PRSS23O95084 383 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 BCL10O95999 233 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 RAF1P04049 648 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 CD3EP07766 207 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 SAGP10523 405 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-211ENST00000475728 HLA-DOBP13765 273 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 IFNGR1P15260 489 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 MSX2P35548 267 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-211ENST00000475728 SLC9A3P48764 834 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 DAP3P51398 398 aaKnown RBP12.69□□□□□ -0.38
ABCF3-211ENST00000475728 PRKCDQ05655 676 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 TRIM25Q14258 630 aaKnown RBP12.69□□□□□ -0.38
ABCF3-211ENST00000475728 TAF11Q15544 211 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 ANKRD16Q6P6B7 361 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 PAMR1Q6UXH9 720 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 MBOAT2Q6ZWT7 520 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 DHFR2Q86XF0 187 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 CCDC36Q8IYA8 594 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 C20orf196Q8IYI0 205 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 OR52N5Q8NH56 324 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 OR6X1Q8NH79 312 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 MAGEE2Q8TD90 523 aaPredicted RBP12.69□□□□□ -0.38
ABCF3-211ENST00000475728 RADILQ96JH8 1075 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 ZNF347Q96SE7 839 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 INIPQ9NRY2 104 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 C20orf141Q9NUB4 165 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 MED29Q9NX70 200 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 TAS2R1Q9NYW7 299 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 MGAT4BQ9UQ53 548 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 RNF115Q9Y4L5 304 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 SLC25A15Q9Y619 301 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 V9GYQ6 96 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
ABCF3-211ENST00000475728 PDZD2O15018 2839 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 NPIPB13A6NJU9 1138 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 EFCAB9A8MZ26 197 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 NPIPB4C9JG80 1138 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 MCIDASD6RGH6 385 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 hCG_2039718K7EN88 272 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 FABP3P05413 133 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 CDH2P19022 906 aaPredicted RBP12.68□□□□□ -0.38
ABCF3-211ENST00000475728 PTAFRP25105 342 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 LOXP28300 417 aaPredicted RBP12.68□□□□□ -0.38
ABCF3-211ENST00000475728 CSNK1A1P48729 337 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 FOXG1P55316 489 aaPredicted RBP12.68□□□□□ -0.38
ABCF3-211ENST00000475728 BIDP55957 195 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 UBE2NP61088 152 aaKnown RBP12.68□□□□□ -0.38
ABCF3-211ENST00000475728 VLDLRP98155 873 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 RPL18Q07020 188 aaKnown RBP12.68□□□□□ -0.38
ABCF3-211ENST00000475728 KEAP1Q14145 624 aa12.68□□□□□ -0.38
ABCF3-211ENST00000475728 FGD3Q5JSP0 725 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 318.7 ms