RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 DECR2Q9NUI1 292 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 POFUT2Q9Y2G5 429 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 A0A096LPI6 279 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 IGHV1-69-2A0A0G2JMI3 117 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 CLDN25C9JDP6 229 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 ALDH3A1P30838 453 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 GIPRP48546 466 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 ANXA11P50995 505 aaKnown RBP16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 AQP5P55064 265 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 RAB1AP62820 205 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 CHI3L2Q15782 390 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 FXNQ16595 210 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 ARMCX4Q5H9R4 360 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 RGS7BPQ6MZT1 257 aaPredicted RBP16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 RAB1CQ92928 201 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 DVL3Q92997 716 aaPredicted RBP16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 SLC25A28Q96A46 364 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 LRRC58Q96CX6 371 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 OR2M2Q96R28 347 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 GAL3ST1Q99999 423 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 SEC14L4Q9UDX3 406 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 OPN4Q9UHM6 478 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 WIPI2Q9Y4P8 454 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 CMYA5Q8N3K9 4069 aa16.18■□□□□ 0.18
NCKIPSD-209ENST00000470006 C17orf100A8MU93 164 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 ACAA2P42765 397 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 EMX2Q04743 252 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 WHAMMP3Q1A5X7 153 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 HFEQ30201 348 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 PCGF3Q3KNV8 242 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 MMEL1Q495T6 779 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 PHYHD1Q5SRE7 291 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 DOK3Q7L591 496 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 VRK2Q86Y07 508 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 WDFY1Q8IWB7 410 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 OR52P1PQ8NH57 321 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 STK35Q8TDR2 534 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 TAF15Q92804 592 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■■□□ 14.6
NCKIPSD-209ENST00000470006 PPP1R36Q96LQ0 422 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 MECRQ9BV79 373 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 SLITRK2Q9H156 845 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 OR51B6Q9H340 312 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 B3GAT2Q9NPZ5 323 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 UBAP1Q9NZ09 502 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 SLC7A8Q9UHI5 535 aa16.17■□□□□ 0.18
NCKIPSD-209ENST00000470006 ISPDA4D126 451 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 CDHR4A6H8M9 788 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 AIM2O14862 343 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 CLPTM1O96005 669 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 C1QCP02747 245 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 FAM157BP0CG42 384 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 B4GALT1P15291 398 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 RPS4Y1P22090 263 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 CRYBB2P43320 205 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 RAB39AQ14964 217 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 LIN52Q52LA3 116 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 ZNF836Q6ZNA1 936 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 USP51Q70EK9 711 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 ST7LQ8TDW4 575 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 NUP50Q9UKX7 468 aa16.16■□□□□ 0.18
NCKIPSD-209ENST00000470006 FTCDNL1E5RQL4 147 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 NPIPB7O75200 414 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 FSHBP01225 129 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 CBLP22681 906 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 KLF3P57682 345 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 CAMK2DQ13557 499 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 TSTQ16762 297 aaKnown RBP16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 HIST2H2BDQ6DRA6 164 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 LEG1Q6P5S2 330 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 SNX32Q86XE0 403 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 ICA1LQ8NDH6 482 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 SYNPRQ8TBG9 265 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 PNPT1Q8TCS8 783 aaKnown RBP16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 KTI12Q96EK9 354 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 TSPAN32Q96QS1 320 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 EMC6Q9BV81 110 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 CACYBPQ9HB71 228 aaKnown RBP16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 ARMCX1Q9P291 453 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 B3GAT1Q9P2W7 334 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 ZNF69Q9UC07 566 aa16.15■□□□□ 0.18
NCKIPSD-209ENST00000470006 SLC22A23A1A5C7 686 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 M0R082 166 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 UBL3O95164 117 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 LCKP06239 509 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 PRG2P13727 222 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 MDKP21741 143 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 PCGF2P35227 344 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 ATP4BP51164 291 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 MFSD13AQ14CX5 517 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 UEVLDQ8IX04 471 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 C20orf196Q8IYI0 205 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 TMEM123Q8N131 208 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 BCL6BQ8N143 479 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 MIER2Q8N344 545 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 TRIML2Q8N7C3 387 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 MNS1Q8NEH6 495 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 OR6N1Q8NGY5 312 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 ZNF417Q8TAU3 575 aa16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 POP5Q969H6 163 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-209ENST00000470006 ZNF75AQ96N20 296 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms