RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DPY19L2P2Q6ZN68 376 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 NCCRP1Q6ZVX7 275 aaPredicted RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 SLC35D2Q76EJ3 337 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 AAED1Q7RTV5 226 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 CBR4Q8N4T8 237 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 ZIC4Q8N9L1 334 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 LRRC75AQ8NAA5 344 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF385AQ96PM9 386 aaKnown RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 POLDIP3Q9BY77 421 aaKnown RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 PIGMQ9H3S5 423 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 SMURF2Q9HAU4 748 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 C8orf4Q9NR00 106 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 TBC1D23Q9NUY8 699 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF462Q96JM2 2506 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 RP1L1Q8IWN7 2480 aaPredicted RBP13.5□□□□□ -0.25
SNIP1-202ENST00000468040 MCIDASD6RGH6 385 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 H3BN98 237 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 EI24O14681 340 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 BCL10O95999 233 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 IGHMP01871 453 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 OSMP13725 252 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 APEHP13798 732 aaKnown RBP13.5□□□□□ -0.25
SNIP1-202ENST00000468040 IFNGR1P15260 489 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 CHRNB4P30926 498 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 RPS6KA3P51812 740 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 CLDN17P56750 224 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 FXYD6P3P58550 94 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ADORA2A-AS1P86434 159 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 DAG1Q14118 895 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 FAM205BPQ63HN1 556 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 KDM4DQ6B0I6 523 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ZBTB49Q6ZSB9 765 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 IGFN1Q86VF2 1251 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 MED12LQ86YW9 2145 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 TEX47Q8TBZ9 253 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ASB5Q8WWX0 329 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 APH1AQ96BI3 265 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF775Q96BV0 537 aaPredicted RBP13.5□□□□□ -0.25
SNIP1-202ENST00000468040 SAMD8Q96LT4 415 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ADAD1Q96M93 576 aaKnown RBP13.5□□□□□ -0.25
SNIP1-202ENST00000468040 KATNB1Q9BVA0 655 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 TXNIPQ9H3M7 391 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 EGLN3Q9H6Z9 239 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 REV1Q9UBZ9 1251 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 RNF6Q9Y252 685 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 ORC6Q9Y5N6 252 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 NBASA2RRP1 2371 aa13.5□□□□□ -0.25
SNIP1-202ENST00000468040 OR6C65A6NJZ3 312 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF726A6NNF4 738 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 CASQ2O14958 399 aaPredicted RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 SOX14O95416 240 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 ATP6V1G2O95670 118 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 ALPLP05186 524 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 CD8BP10966 210 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 AGAP20933 346 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 BMP5P22003 454 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 BIDP55957 195 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 RPL27P61353 136 aaKnown RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 ACKR1Q16570 336 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 SLC36A3Q495N2 470 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 GPR139Q6DWJ6 353 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 CASP12Q6UXS9 341 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 NHLRC1Q6VVB1 395 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 NUFIP2Q7Z417 695 aaKnown RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 KIF18BQ86Y91 864 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 CCDC71Q8IV32 467 aaPredicted RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 OR6X1Q8NH79 312 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 MAGEE2Q8TD90 523 aaPredicted RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 STARD4Q96DR4 205 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 IFT27Q9BW83 186 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 C12orf49Q9H741 205 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 NRIP3Q9NQ35 241 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 PLSCR4Q9NRQ2 329 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 MED29Q9NX70 200 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 GRHPRQ9UBQ7 328 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
SNIP1-202ENST00000468040 IL20RAQ9UHF4 553 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 PROCRQ9UNN8 238 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 BAIAP2Q9UQB8 552 aa13.49□□□□□ -0.25
SNIP1-202ENST00000468040 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 A6NIZ1 184 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 PYCARD-AS1I3L0S3 204 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 SOCS2O14508 198 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ARPC3O15145 178 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 IDH3BO43837 385 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 SLC43A1O75387 559 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF432O94892 652 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 TP53P04637 393 aaPredicted RBP13.48□□□□□ -0.25
SNIP1-202ENST00000468040 PEX2P28328 305 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 SDHAP31040 664 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 OR3A2P47893 321 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 RAD23AP54725 363 aa13.48□□□□□ -0.25
SNIP1-202ENST00000468040 RAP1BP61224 184 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms