RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RPL27P61353 136 aaKnown RBP12.77□□□□□ -0.37
COL6A1-202ENST00000463060 ISL1P61371 349 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 IL18R1Q13478 541 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 TAF11Q15544 211 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 ACSF3Q4G176 576 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF691Q5VV52 312 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 NSUN5P2Q63ZY6 315 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 GFRALQ6UXV0 394 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 SEM1Q6ZVN7 128 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 DOLPP1Q86YN1 238 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 ARIH2OSQ8N7S6 290 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 OR9K2Q8NGE7 335 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 RHOXF1Q8NHV9 184 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 FBLIM1Q8WUP2 373 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 WNT2BQ93097 391 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 BBC3Q96PG8 261 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-202ENST00000463060 BCO1Q9HAY6 547 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 CMC2Q9NRP2 79 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF226Q9NYT6 803 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.37
COL6A1-202ENST00000463060 FLVCR1Q9Y5Y0 555 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 KALRNO60229 2985 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 ZGRF1Q86YA3 2104 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 WDR1O75083 606 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 SLC2A10O95528 541 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 GABRA1P14867 456 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 IFNGR1P15260 489 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF43P17038 809 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 MYF6P23409 242 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 PTGER4P35408 488 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 POU3F1Q03052 451 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 RASGEF1BQ0VAM2 473 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 RNPS1Q15287 305 aaKnown RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 GUSBP1Q15486 140 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 SLC25A30Q5SVS4 291 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 SLC35F1Q5T1Q4 408 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 CHMP1BQ7LBR1 199 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 UEVLDQ8IX04 471 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 NPEPL1Q8NDH3 523 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 ST6GALNAC3Q8NDV1 305 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 ABHD3Q8WU67 409 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 TRUB1Q8WWH5 349 aaKnown RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 ASB10Q8WXI3 467 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF385AQ96PM9 386 aaKnown RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 POLDIP3Q9BY77 421 aaKnown RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 MRPL13Q9BYD1 178 aaKnown RBP12.76□□□□□ -0.37
COL6A1-202ENST00000463060 NDEL1Q9GZM8 345 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 MED29Q9NX70 200 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 TVP23BQ9NYZ1 205 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 FAM215AQ9Y5M1 114 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 HSPE1-MOB4S4R3N1 261 aa12.76□□□□□ -0.37
COL6A1-202ENST00000463060 TEX13CA0A0J9YWL9 993 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 MBD3L4A6NDZ8 208 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 MBD3L3A6NE82 208 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 MBD3L5A6NJ08 208 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 PRKYO43930 277 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF432O94892 652 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 BCL10O95999 233 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 PLGP00747 810 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 PCYT1AP49585 367 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 RUNX1T1Q06455 604 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 SF3B4Q15427 424 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 MESTQ5EB52 335 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 LAIR2Q6ISS4 152 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 RPTNQ6XPR3 784 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 PTCHD4Q6ZW05 846 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 GPAT4Q86UL3 456 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 CD163Q86VB7 1156 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 ENTHD1Q8IYW4 607 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 OR8J1Q8NGP2 316 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 OR6X1Q8NH79 312 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 MBD3L2Q8NHZ7 208 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-202ENST00000463060 FAM81AQ8TBF8 368 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 PTP4A1Q93096 173 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 RASD2Q96D21 266 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 NMNAT2Q9BZQ4 307 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 GRHPRQ9UBQ7 328 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 RNF6Q9Y252 685 aa12.75□□□□□ -0.37
COL6A1-202ENST00000463060 MED12LQ86YW9 2145 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 SLC35F4A4IF30 521 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 M0R129 80 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 GPR171O14626 319 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 SLC19A2O60779 497 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TOXO94900 526 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 TPOP07202 933 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 FCGR2AP12318 317 aa12.74□□□□□ -0.37
COL6A1-202ENST00000463060 ABOP16442 354 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms