RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NPRL2Q8WTW4 380 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 MITD1Q8WV92 249 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 IL1F10Q8WWZ1 152 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ARNTL2Q8WYA1 636 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 TMEM80Q96HE8 168 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 PLEKHA8Q96JA3 519 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ZNF578Q96N58 590 aaPredicted RBP2.37□□□□□ -2.03
HPS3-203ENST00000460822 CLCC1Q96S66 551 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 NAPGQ99747 312 aaPredicted RBP2.37□□□□□ -2.03
HPS3-203ENST00000460822 CHCHD5Q9BSY4 110 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 FGFBP2Q9BYJ0 223 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 FBXO44Q9H4M3 255 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 JPT2Q9H910 190 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 LYRM4Q9HD34 91 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 AMBNQ9NP70 447 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 SCRT2Q9NQ03 307 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 TIGARQ9NQ88 270 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 PAK1IP1Q9NWT1 392 aaPredicted RBP2.37□□□□□ -2.03
HPS3-203ENST00000460822 BFARQ9NZS9 450 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ASIC3Q9UHC3 531 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 MAP3K15Q6ZN16 1313 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 SH3TC1Q8TE82 1336 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 BCL9LQ86UU0 1499 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 PALLDQ8WX93 1383 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 KIF1AQ12756 1690 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ADAMTS7Q9UKP4 1686 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 IGHV3-16A0A0C4DH30 117 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 LOC100506127A0A0U1RQW1 187 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 VSTM2BA6NLU5 285 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ZNF487B1APH4 448 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SOCS3O14543 225 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CLOCKO15516 846 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CGAP01215 116 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 PLEKP08567 350 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 CT62P0C5K7 136 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 STAG3L2P0CL84 134 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ZNF43P17038 809 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 POLR2EP19388 210 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 EIF2S2P20042 333 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 PTNP21246 168 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 FGF9P31371 208 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 KCNJ2P63252 427 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 VLDLRP98155 873 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 XIAPP98170 497 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 PPIL2Q13356 520 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ITIH4Q14624 930 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ZNF77Q15935 545 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 Q3ZCU0 254 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CEP85LQ5SZL2 805 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 RESP18Q5W5W9 173 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 TWF2Q6IBS0 349 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 NIPA1Q7RTP0 329 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 OR4F6Q8NGB9 312 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 RHEBL1Q8TAI7 183 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MARCH1Q8TCQ1 289 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 GTF3AQ92664 365 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.36□□□□□ -2.03
HPS3-203ENST00000460822 FAF2Q96CS3 445 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CELF6Q96J87 481 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 C8orf76Q96K31 380 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CYP2S1Q96SQ9 504 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CNN2Q99439 309 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 GAL3ST1Q99999 423 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 P2RY13Q9BPV8 354 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MAPKAP1Q9BPZ7 522 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 HCAR1Q9BXC0 346 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 IL22Q9GZX6 179 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 PPA2Q9H2U2 334 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 PNO1Q9NRX1 252 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 WRAP73Q9P2S5 460 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 DIP2BQ9P265 1576 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 TJP1Q07157 1748 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 PKD1L3Q7Z443 1732 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SCN11AQ9UI33 1791 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MYH7BA7E2Y1 1941 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 AKAP11Q9UKA4 1901 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 UBR1Q8IWV7 1749 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SNED1Q8TER0 1413 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 A0A0J9YYE9 177 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 GOLGA8KD6RF30 607 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 E7EWF7 191 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 H0YHG0 523 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 RRP8O43159 456 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 CXCL13O43927 109 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 TRBC1P01850 177 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MBP02144 154 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 MMP1P03956 469 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 GYPCP04921 128 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ZNF24P17028 368 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 STOMP27105 288 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 GTF2E2P29084 291 aaKnown RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 LEPP41159 167 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ETV5P41161 510 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 UQCRFS1P47985 274 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 SLC8A3P57103 927 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 ERVK11-1P61568 191 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 YWHAGP61981 247 aaKnown RBP eCLIP2.36□□□□□ -2.03
HPS3-203ENST00000460822 GNGT1P63211 74 aa2.36□□□□□ -2.03
HPS3-203ENST00000460822 CYLC2Q14093 348 aaPredicted RBP2.36□□□□□ -2.03
HPS3-203ENST00000460822 MICAQ29983 383 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms