RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 HLA-DOBP13765 273 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 CD247P20963 164 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 CAPZA2P47755 286 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 NPTX1Q15818 432 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 RABL3Q5HYI8 236 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 COQ5Q5HYK3 327 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 REP15Q6BDI9 236 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 RBM45Q8IUH3 476 aaKnown RBP13.31□□□□□ -0.28
CHD3-205ENST00000449744 TMEM123Q8N131 208 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 PCYOX1LQ8NBM8 494 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 OR8J3Q8NGG0 315 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 OR6N1Q8NGY5 312 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 OR5J2Q8NH18 312 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 ADAMTS16Q8TE57 1224 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 PROX1Q92786 737 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 TAMM41Q96BW9 452 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 FBXO17Q96EF6 278 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 NELFAQ9H3P2 528 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 CRNNQ9UBG3 495 aaPredicted RBP13.31□□□□□ -0.28
CHD3-205ENST00000449744 SLC7A7Q9UM01 511 aa13.31□□□□□ -0.28
CHD3-205ENST00000449744 LOC100653049A0A140TA62 436 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 ZNF99A8MXY4 864 aaPredicted RBP13.3□□□□□ -0.28
CHD3-205ENST00000449744 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 C11orf98E9PRG8 122 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 H7C417 338 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 PLPP3O14495 311 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 KRT34O76011 436 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 CECR9P0C854 216 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 CBR1P16152 277 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 GZMMP51124 257 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 DSCR9P59020 149 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 NAAAQ02083 359 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 ERICH5Q6P6B1 374 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 LINC00114Q6XXX2 140 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 DNM1P46Q6ZS02 220 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 CCDC80Q76M96 950 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 PXKQ7Z7A4 578 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 SNX32Q86XE0 403 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 CCDC36Q8IYA8 594 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 C20orf196Q8IYI0 205 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 FAM169BQ8N8A8 192 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 OR4D11Q8NGI4 311 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 HTRA1Q92743 480 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 TXNDC15Q96J42 360 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 MPP4Q96JB8 637 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 LRR1Q96L50 414 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 SAR1AQ9NR31 198 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 GID8Q9NWU2 228 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 MED29Q9NX70 200 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 POFUT2Q9Y2G5 429 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 SH3GLB1Q9Y371 365 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 PLCE1Q9P212 2302 aa13.3□□□□□ -0.28
CHD3-205ENST00000449744 VSTM5A8MXK1 200 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 KPNA4O00629 521 aaPredicted RBP13.29□□□□□ -0.28
CHD3-205ENST00000449744 SEC14L2O76054 403 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 CH25HO95992 272 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 IFNA14P01570 189 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 IGLV1-44P01699 117 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 HIST1H2ABP04908 130 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 UMPSP11172 480 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 ARR3P36575 388 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 IDH3GP51553 393 aaPredicted RBP13.29□□□□□ -0.28
CHD3-205ENST00000449744 SNRPD2P62316 118 aaKnown RBP13.29□□□□□ -0.28
CHD3-205ENST00000449744 NPRL3Q12980 569 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 CAMK2DQ13557 499 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 PHYHD1Q5SRE7 291 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 VHLLQ6RSH7 139 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 HIST3H2AQ7L7L0 130 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 OR4F15Q8NGB8 312 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 HIST1H2ACQ93077 130 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 ZNF837Q96EG3 531 aaPredicted RBP13.29□□□□□ -0.28
CHD3-205ENST00000449744 ULBP2Q9BZM5 246 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 NANSQ9NR45 359 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 CA10Q9NS85 328 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 BAG5Q9UL15 447 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 USP22Q9UPT9 525 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 CAPN7Q9Y6W3 813 aa13.29□□□□□ -0.28
CHD3-205ENST00000449744 VPS13CQ709C8 3753 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 IGHV4-30-2A0A087WSY4 118 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 FXYD1O00168 92 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 RNF13O43567 381 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 THY1P04216 161 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 SERPINF1P36955 418 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 EFNA4P52798 201 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 BIDP55957 195 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 GUCY1A3Q02108 690 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 ZNF74Q16587 644 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 CGB2Q6NT52 195 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 WDR88Q6ZMY6 472 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 CARM1Q86X55 608 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 CALHM3Q86XJ0 350 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
CHD3-205ENST00000449744 FAM168AQ92567 244 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 SLC19A3Q9BZV2 496 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 PCDHAC1Q9H158 963 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms