RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 MRPL37Q9BZE1 423 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 LHPPQ9H008 270 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 FCF1Q9Y324 198 aaKnown RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF536O15090 1300 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 CLIC3O95833 236 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ARG2P78540 354 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 RELBQ01201 579 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 TEAD2Q15562 447 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 SOWAHCQ53LP3 525 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 LRP11Q86VZ4 500 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 C2CD4CQ8TF44 421 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 LMAN1LQ9HAT1 526 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 MUTYHQ9UIF7 546 aa8.35□□□□□ -1.07
NIPBL-202ENST00000448238 ATXN7L1Q9ULK2 861 aaPredicted RBP8.35□□□□□ -1.07
NIPBL-202ENST00000448238 GPR31O00270 319 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 GOSR1O95249 250 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF429Q86V71 674 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CHST14Q8NCH0 376 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 SLC39A13Q96H72 371 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 SLC6A18Q96N87 628 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM191AQ9H0A3 160 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 POFUT1Q9H488 388 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 UBL3O95164 117 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CYC1P08574 325 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CNR2P34972 360 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ETV3P41162 512 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CD81P60033 236 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 MLLT11Q13015 90 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CLLU1Q5K131 121 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CXCL17Q6UXB2 119 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 RAB24Q969Q5 203 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 MS4A4EQ96PG1 132 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 SLC22A12Q96S37 553 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 VCX2Q9H322 139 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 FER1L5A0AVI2 2057 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 H7BY64 318 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 GPR37O15354 613 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 LY86O95711 162 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ABCD3P28288 659 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 OR8B8Q15620 311 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 TPRG1Q6ZUI0 275 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 GDPD3Q7L5L3 318 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 SLC16A14Q7RTX9 510 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 IRF2BP2Q7Z5L9 587 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ZFAND4Q86XD8 727 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 OR2AE1Q8NHA4 323 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 PLEKHA2Q9HB19 425 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 SLC6A20Q9NP91 592 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ZCWPW2A0A1B0GU75 182 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 A0A1W2PPQ1 181 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ABCD4O14678 606 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 DNAL4O96015 105 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 GHRHP01286 108 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 PLP1P60201 277 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 SLC36A2Q495M3 483 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CMPK2Q5EBM0 449 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ST8SIA2Q92186 375 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 PKMYT1Q99640 499 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 OARD1Q9Y530 152 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ENPP4Q9Y6X5 453 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 BLACEA4D250 179 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ICAM2P13598 275 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 TYRP1P17643 537 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 BSGP35613 385 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CDC34P49427 236 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 COX19Q49B96 90 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 PRAMEF20Q5VT98 475 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CITED2Q99967 270 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF552Q9H707 407 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 PGAP2Q9UHJ9 254 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ERVK-7P63135 1459 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ADGRL2O95490 1459 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 GABRR3A8MPY1 467 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF814B7Z6K7 855 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 IGHEP01854 428 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 ANKRD34CP0C6C1 535 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 CCR7P32248 378 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 KIR2DL1P43626 348 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 KIR2DL2P43627 348 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 NKX2-1P43699 371 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 GAB1Q13480 694 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 Q8N9G6 341 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-202ENST00000448238 NECAP1Q8NC96 275 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 OR51A2Q8NGJ7 313 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 LHX4Q969G2 390 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 NKX2-4Q9H2Z4 354 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 FZD10Q9ULW2 581 aa8.34□□□□□ -1.07
NIPBL-202ENST00000448238 PIRO00625 290 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 NXPH2O95156 264 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 CD99P14209 185 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 UBE2MP61081 183 aaKnown RBP8.34□□□□□ -1.08
NIPBL-202ENST00000448238 HHEXQ03014 270 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 SLC35G1Q2M3R5 365 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 TPGS2Q68CL5 300 aa8.34□□□□□ -1.08
NIPBL-202ENST00000448238 PODNL1Q6PEZ8 512 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms