RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FXYD1O00168 92 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 SSX4O60224 188 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 IFNA14P01570 189 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 CRYAAP02489 173 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 HLA-DOBP13765 273 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 HOXB1P14653 301 aaPredicted RBP17.52■□□□□ 0.4
LRCH3-208ENST00000443727 APOBEC3AP31941 199 aaPredicted RBP17.52■□□□□ 0.4
LRCH3-208ENST00000443727 CAPZA2P47755 286 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 NUDT6P53370 316 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 CHRNB3Q05901 458 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 RAB35Q15286 201 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 CEACAM16Q2WEN9 425 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 ERICH5Q6P6B1 374 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 CCDC80Q76M96 950 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 TMEM123Q8N131 208 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 OR4D11Q8NGI4 311 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 EMC6Q9BV81 110 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 MED4Q9NPJ6 270 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 BAG5Q9UL15 447 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 SH3GLB1Q9Y371 365 aa17.52■□□□□ 0.4
LRCH3-208ENST00000443727 C11orf98E9PRG8 122 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 KPNA4O00629 521 aaPredicted RBP17.51■□□□□ 0.39
LRCH3-208ENST00000443727 PLPP3O14495 311 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 CH25HO95992 272 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 HIST1H2ABP04908 130 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 ADORA3P0DMS8 318 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 LINC00114Q6XXX2 140 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 HIST3H2AQ7L7L0 130 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 PXKQ7Z7A4 578 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 CALHM3Q86XJ0 350 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 OR6N1Q8NGY5 312 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 OR5J2Q8NH18 312 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 HIST1H2ACQ93077 130 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 TXNDC15Q96J42 360 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 MPP4Q96JB8 637 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 REG4Q9BYZ8 158 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 CCDC134Q9H6E4 229 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 MED29Q9NX70 200 aa17.51■□□□□ 0.39
LRCH3-208ENST00000443727 TLN2Q9Y4G6 2542 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 SLC35F4A4IF30 521 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 C11orf71Q6IPW1 123 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 WDR88Q6ZMY6 472 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 CARM1Q86X55 608 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 C20orf196Q8IYI0 205 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 C10orf82Q8WW14 230 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 RHNO1Q9BSD3 238 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 KATNB1Q9BVA0 655 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 NELFAQ9H3P2 528 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 NANSQ9NR45 359 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 ARMCX1Q9P291 453 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 PMF1-BGLAPU3KQ54 211 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 NSD1Q96L73 2696 aaPredicted RBP17.5■□□□□ 0.39
LRCH3-208ENST00000443727 HEATR1Q9H583 2144 aaKnown RBP17.5■□□□□ 0.39
LRCH3-208ENST00000443727 NAV3Q8IVL0 2385 aa17.5■□□□□ 0.39
LRCH3-208ENST00000443727 CSPG4Q6UVK1 2322 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 ZNF99A8MXY4 864 aaPredicted RBP17.49■□□□□ 0.39
LRCH3-208ENST00000443727 SLC22A2O15244 555 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 SEC14L2O76054 403 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 THY1P04216 161 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 UMPSP11172 480 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 PCSK6P29122 969 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 TAS2R41P59536 307 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 PPP2R2BQ00005 443 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 CAMK2DQ13557 499 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 ZNF74Q16587 644 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 KRTAP21-3Q3LHN1 58 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 DEF8Q6ZN54 512 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 CCDC36Q8IYA8 594 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 MAPK1IP1LQ8NDC0 245 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 HTRA1Q92743 480 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 FBXO17Q96EF6 278 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 ZNF837Q96EG3 531 aaPredicted RBP17.49■□□□□ 0.39
LRCH3-208ENST00000443727 LRR1Q96L50 414 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 ULBP2Q9BZM5 246 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 SLC19A3Q9BZV2 496 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 PCDHAC1Q9H158 963 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 USP22Q9UPT9 525 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 POFUT2Q9Y2G5 429 aa17.49■□□□□ 0.39
LRCH3-208ENST00000443727 RNF13O43567 381 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 LYPD3O95274 346 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 CECR9P0C854 216 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 IFNGR1P15260 489 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 CBR1P16152 277 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 MDH1P40925 334 aaKnown RBP17.48■□□□□ 0.39
LRCH3-208ENST00000443727 IDH3GP51553 393 aaPredicted RBP17.48■□□□□ 0.39
LRCH3-208ENST00000443727 CRYBA2P53672 197 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 BIDP55957 195 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 NAAAQ02083 359 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 NPRL3Q12980 569 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 C3orf36Q3SXR2 165 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 LRRC23Q53EV4 343 aaPredicted RBP17.48■□□□□ 0.39
LRCH3-208ENST00000443727 PHYHD1Q5SRE7 291 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 CLEC2AQ6UVW9 174 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 TSPYL5Q86VY4 417 aaPredicted RBP17.48■□□□□ 0.39
LRCH3-208ENST00000443727 POU5F2Q8N7G0 328 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 FAM169BQ8N8A8 192 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 OR2T12Q8NG77 320 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 RCN3Q96D15 328 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 ZNF583Q96ND8 569 aa17.48■□□□□ 0.39
LRCH3-208ENST00000443727 CRNNQ9UBG3 495 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms