RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 WDFY1Q8IWB7 410 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 GPR137CQ8N3F9 429 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 RNF148Q8N7C7 305 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 ZNF611Q8N823 705 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 PIK3C3Q8NEB9 887 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 KBTBD8Q8NFY9 601 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 HIST1H2ACQ93077 130 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 HSH2DQ96JZ2 352 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 HS6ST2Q96MM7 605 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 GPR35Q9HC97 309 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 TAS2R5Q9NYW4 299 aa20.71■□□□□ 0.91
VARS-217ENST00000440048 VPS13CQ709C8 3753 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 SLC35F4A4IF30 521 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 SERPINI2O75830 405 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 UMPSP11172 480 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 PRPS1P60891 318 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 ST3GAL3Q11203 375 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 TBRG1Q3YBR2 411 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 ZNF672Q499Z4 452 aaPredicted RBP20.7■□□□□ 0.9
VARS-217ENST00000440048 PHYHD1Q5SRE7 291 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 C1QTNF12Q5T7M4 302 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 CARD17Q5XLA6 110 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 GLYATQ6IB77 296 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 KLHL17Q6TDP4 642 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 KLHL24Q6TFL4 600 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 TMEM108Q6UXF1 575 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 FKBP9P1Q75LS8 142 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 C20orf196Q8IYI0 205 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 PGAM4Q8N0Y7 254 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 ANKK1Q8NFD2 765 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 BCL2L2Q92843 193 aaPredicted RBP20.7■□□□□ 0.9
VARS-217ENST00000440048 C20orf141Q9NUB4 165 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 FAM53CQ9NYF3 392 aa20.7■□□□□ 0.9
VARS-217ENST00000440048 J3KTA2 159 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 M0R1B8 84 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 ABCD4O14678 606 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 OR7A10O76100 309 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 FAM107AO95990 144 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 IGF2P01344 180 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 FUT4P22083 530 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 IFNA8P32881 189 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 SH3BGRP55822 239 aaPredicted RBP20.69■□□□□ 0.9
VARS-217ENST00000440048 GKAP1Q5VSY0 366 aaPredicted RBP20.69■□□□□ 0.9
VARS-217ENST00000440048 FAM156AQ8NDB6 213 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 RBM15BQ8NDT2 890 aaKnown RBP20.69■□□□□ 0.9
VARS-217ENST00000440048 IGFBPL1Q8WX77 278 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 ZNF837Q96EG3 531 aaPredicted RBP20.69■□□□□ 0.9
VARS-217ENST00000440048 SGTBQ96EQ0 304 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 CRLF2Q9HC73 371 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 MED31Q9Y3C7 131 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 USF3Q68DE3 2245 aa20.69■□□□□ 0.9
VARS-217ENST00000440048 ZNF726A6NNF4 738 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 SHISA9B4DS77 424 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 M0R3G1 203 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 FFAR1O14842 300 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 RNF13O43567 381 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 SMPD2O60906 423 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 WNT11O96014 354 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 IFNGR1P15260 489 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 FUT1P19526 365 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 PTAFRP25105 342 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 CD40P25942 277 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 ARF1P84077 181 aaKnown RBP20.68■□□□□ 0.9
VARS-217ENST00000440048 CAMK2DQ13557 499 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 CEACAM16Q2WEN9 425 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 ANKRD16Q6P6B7 361 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 NANOGNBQ7Z5D8 188 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 OFCC1Q8IZS5 231 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 FITM2Q8N6M3 262 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 FBXW5Q969U6 566 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 LRR1Q96L50 414 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 FNDC11Q9BVV2 318 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 NELFAQ9H3P2 528 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 OBP2BQ9NPH6 170 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 RHCGQ9UBD6 479 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 RPS6KA6Q9UK32 745 aa20.68■□□□□ 0.9
VARS-217ENST00000440048 MAGED1Q9Y5V3 778 aaPredicted RBP20.68■□□□□ 0.9
VARS-217ENST00000440048 NIPBLQ6KC79 2804 aaeCLIP20.67■□□□□ 0.9
VARS-217ENST00000440048 A0A096LPE4 126 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 A0A1W2PPZ6 126 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 PIP5K1CO60331 668 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 HSD17B1P14061 328 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 BIDP55957 195 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 RIPPLY3P57055 190 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 KRT72Q14CN4 511 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 SLC35D2Q76EJ3 337 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 TGIF2LYQ8IUE0 185 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 PIAS4Q8N2W9 510 aaPredicted RBP20.67■□□□□ 0.9
VARS-217ENST00000440048 MAGEE2Q8TD90 523 aaPredicted RBP20.67■□□□□ 0.9
VARS-217ENST00000440048 CDRT15Q96T59 188 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 MAN2C1Q9NTJ4 1040 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 CD300AQ9UGN4 299 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 MGAT4BQ9UQ53 548 aa20.67■□□□□ 0.9
VARS-217ENST00000440048 ZFHX3Q15911 3703 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 BLOC1S5-TXNDC5H3BN57 136 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 GMNNO75496 209 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 PRSS23O95084 383 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 CD99P14209 185 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 TCN1P20061 433 aaPredicted RBP20.66■□□□□ 0.9
VARS-217ENST00000440048 UBE2NP61088 152 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms