RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 B3GNTL1Q67FW5 361 aaPredicted RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 PWWP2BQ6NUJ5 590 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 STEAP1BQ6NZ63 245 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 RHOUQ7L0Q8 258 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 DPY19L4Q7Z388 723 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 PXKQ7Z7A4 578 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SLC35F3Q8IY50 421 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SAMD14Q8IZD0 417 aaPredicted RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 LINC00518Q8N0U6 118 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 POMGNT2Q8NAT1 580 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 ZSCAN1Q8NBB4 408 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 OR5M9Q8NGP3 310 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SMARCD2Q92925 531 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SLC25A36Q96CQ1 311 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 RBM18Q96H35 190 aaKnown RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 PRSS27Q9BQR3 290 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 DNTTIP1Q9H147 329 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 CKLFQ9UBR5 152 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 ERVK-19Q9WJR5 959 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SCN8AQ9UQD0 1980 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 ANKRD20A5PA0PJZ0 165 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 ZNF98A6NK75 572 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SNRPGP15A8MWD9 76 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 CTNSO60931 367 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 WDPCPO95876 746 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 GLAP06280 429 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 AGTR1P30556 359 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 PPM1AP35813 382 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SEC13P55735 322 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 MRPS10P82664 201 aaKnown RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 AIMP2Q13155 320 aaKnown RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 Q499Y3 187 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 PRAMEF8Q5VWM4 474 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 PRAMEF7Q5VXH5 474 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 ZNF660Q6AZW8 331 aaPredicted RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 FAM199XQ6PEV8 388 aaPredicted RBP8.3□□□□□ -1.08
COPB1-202ENST00000439561 COMMD2Q86X83 199 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 SPICQ8N5J4 248 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 CDRT4Q8N9R6 151 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 RAB11FIP5Q9BXF6 653 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 TAS2R8Q9NYW2 309 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 COLEC10Q9Y6Z7 277 aa8.3□□□□□ -1.08
COPB1-202ENST00000439561 HELZP42694 1942 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 HIDE1A8MVS5 230 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 GSTZ1O43708 216 aaPredicted RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 CDC40O60508 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
COPB1-202ENST00000439561 B3GALNT1O75752 331 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 UBBP0CG47 229 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 UBCP0CG48 685 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 SPI1P17947 270 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 CAPZA2P47755 286 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 DNASE1L1P49184 302 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 RPS27AP62979 156 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 UBA52P62987 128 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 FZD5Q13467 585 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 ITPRIPL2Q3MIP1 535 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 OR10K2Q6IF99 312 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 TMEM205Q6UW68 189 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 OVCH2Q7RTZ1 564 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 OR52R1Q8NGF1 315 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 HAVCR1Q96D42 359 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 TRIM2Q9C040 744 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 AICDAQ9GZX7 198 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 GPN3Q9UHW5 284 aaPredicted RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 SLC6A5Q9Y345 797 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 TRPM6Q9BX84 2022 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 A0A0B4J2A0 478 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 FITM1A5D6W6 292 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 OR5H14A6NHG9 310 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 C4orf47A7E2U8 309 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 PIN1P1O15428 100 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 KCNJ13O60928 360 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 DNAJB6O75190 326 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 SPARCP09486 303 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 GNALP38405 381 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 NANOS3P60323 173 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 PLA2G7Q13093 441 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 EIF2B5Q13144 721 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 DUSP8Q13202 625 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 MLF2Q15773 248 aaPredicted RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 RAB11BQ15907 218 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 DEFB110Q30KQ9 67 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 ENPP7Q6UWV6 458 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 GALNTL5Q7Z4T8 443 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 SVBPQ8N300 66 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 C12orf76Q8N812 135 aaPredicted RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 OR10R2Q8NGX6 335 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 FAM46BQ96A09 425 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 PNPLA2Q96AD5 504 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 MRPS24Q96EL2 167 aaKnown RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 ELF4Q99607 663 aaPredicted RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 CRB3Q9BUF7 120 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 REG4Q9BYZ8 158 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 HRH4Q9H3N8 390 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 APMAPQ9HDC9 416 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms