RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 DOK1Q99704 481 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 CPPED1Q9BRF8 314 aaPredicted RBP13.43□□□□□ -0.26
SEC13-210ENST00000428626 PIMREGQ9BSJ6 248 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 CCDC28BQ9BUN5 200 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 BPESC1Q9GZL8 116 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 TMEM38AQ9H6F2 299 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 B3GNT2Q9NY97 397 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 FKBP7Q9Y680 259 aa13.43□□□□□ -0.26
SEC13-210ENST00000428626 ZNF99A8MXY4 864 aaPredicted RBP13.42□□□□□ -0.26
SEC13-210ENST00000428626 MFN2O95140 757 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 HLA-HP01893 362 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 THY1P04216 161 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 PPOXP50336 477 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 CDH12P55289 794 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
SEC13-210ENST00000428626 SELPLGQ14242 412 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 NPTX1Q15818 432 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 TTMPQ5BVD1 217 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 FAM91A1Q658Y4 838 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 C5orf46Q6UWT4 87 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 NET1Q7Z628 596 aaPredicted RBP13.42□□□□□ -0.26
SEC13-210ENST00000428626 TSPYL5Q86VY4 417 aaPredicted RBP13.42□□□□□ -0.26
SEC13-210ENST00000428626 CDK20Q8IZL9 346 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 PIK3C3Q8NEB9 887 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 GPR32P1Q8NGA4 272 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 OR4F15Q8NGB8 312 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 SLC47A1Q96FL8 570 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 BEX2Q9BXY8 128 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 ZNF442Q9H7R0 627 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 CHODLQ9H9P2 273 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 ZNF224Q9NZL3 707 aa13.42□□□□□ -0.26
SEC13-210ENST00000428626 TESQ9UGI8 421 aaKnown RBP13.42□□□□□ -0.26
SEC13-210ENST00000428626 LOC390937A0A1W2PQ73 354 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 LRP5LA4QPB2 252 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 hCG_2039718K7EN88 272 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 M0R3H8 397 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 NDUFS8O00217 210 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 LYPD3O95274 346 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 OPN1SWP03999 348 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 PAX7P23759 505 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 IL2RGP31785 369 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 GZMKP49863 264 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 PCBP3P57721 371 aaKnown RBP13.41□□□□□ -0.26
SEC13-210ENST00000428626 IL1RL1Q01638 556 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 POU3F1Q03052 451 aaPredicted RBP13.41□□□□□ -0.26
SEC13-210ENST00000428626 DUSP7Q16829 419 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 KRTAP24-1Q3LI83 254 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 RUNDC3AQ59EK9 446 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 WDR88Q6ZMY6 472 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 RETREG3Q86VR2 466 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 KRT73Q86Y46 540 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 UEVLDQ8IX04 471 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 SMYD1Q8NB12 490 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 OR6S1Q8NH40 331 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 RNF217Q8TC41 542 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 LRRC8CQ8TDW0 803 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 SPATA5L1Q9BVQ7 753 aa13.41□□□□□ -0.26
SEC13-210ENST00000428626 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.41□□□□□ -0.26
SEC13-210ENST00000428626 LOC100289279A0A1B0GTE1 492 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 SH3PXD2BA1X283 911 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 PLPP3O14495 311 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 ERLIN1O75477 346 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 STAMBPO95630 424 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 APEHP13798 732 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 NQO1P15559 274 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 NPR2P20594 1047 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 PPIBP23284 216 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 SLC6A2P23975 617 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 ARR3P36575 388 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 CAPZA2P47755 286 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 ATP4BP51164 291 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 SNTB2Q13425 540 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 MFSD13AQ14CX5 517 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 FAM120AOSQ5T036 256 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 KRT80Q6KB66 452 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 LINC00114Q6XXX2 140 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 SPATA21Q7Z572 469 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 RBM45Q8IUH3 476 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 SCAIQ8N9R8 606 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 HIPK4Q8NE63 616 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 TMEM158Q8WZ71 300 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 ARHGDIGQ99819 225 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 SHARPINQ9H0F6 387 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 ZNF385DQ9H6B1 395 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 TMEM27Q9HBJ8 222 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
SEC13-210ENST00000428626 CORINQ9Y5Q5 1042 aa13.4□□□□□ -0.26
SEC13-210ENST00000428626 LYNX1G3V0Z9 82 aa13.39□□□□□ -0.27
SEC13-210ENST00000428626 LILRA1O75019 489 aa13.39□□□□□ -0.27
SEC13-210ENST00000428626 SERPINI2O75830 405 aa13.39□□□□□ -0.27
SEC13-210ENST00000428626 LYNX1P0DP58 116 aa13.39□□□□□ -0.27
SEC13-210ENST00000428626 B4GALT1P15291 398 aa13.39□□□□□ -0.27
SEC13-210ENST00000428626 ZNF14P17017 642 aaPredicted RBP13.39□□□□□ -0.27
SEC13-210ENST00000428626 ZNF23P17027 643 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms