RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ANKRD27Q96NW4 1050 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 SYT3Q9BQG1 590 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 RAD21L1Q9H4I0 556 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 OCEL1Q9H607 264 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 C12orf10Q9HB07 376 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 SDR39U1Q9NRG7 319 aaPredicted RBP14.26□□□□□ -0.13
VARS-216ENST00000428445 B3GNT2Q9NY97 397 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 MYEF2Q9P2K5 600 aaKnown RBP14.26□□□□□ -0.13
VARS-216ENST00000428445 RCE1Q9Y256 329 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 PCDHB14Q9Y5E9 798 aa14.26□□□□□ -0.13
VARS-216ENST00000428445 A0A1B0GWA3 101 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 LRRN3E7EW58 273 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 TRAF3IP2O43734 574 aaPredicted RBP14.25□□□□□ -0.13
VARS-216ENST00000428445 OR2T1O43869 369 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 TPST1O60507 370 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 HPXP02790 462 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 NR4A1P22736 598 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 ARR3P36575 388 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 ALDH3B1P43353 468 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 MAD2L1BPQ15013 274 aaPredicted RBP14.25□□□□□ -0.13
VARS-216ENST00000428445 RGNQ15493 299 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 C6orf10Q5SRN2 563 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 SLC2A7Q6PXP3 512 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 NET1Q7Z628 596 aaPredicted RBP14.25□□□□□ -0.13
VARS-216ENST00000428445 CCDC36Q8IYA8 594 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 C10orf111Q8N326 155 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 ZNF75AQ96N20 296 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 OR52B2Q96RD2 323 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 WFDC6Q9BQY6 131 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 MED29Q9NX70 200 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 RPS6KB2Q9UBS0 482 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 CMAHPQ9Y471 501 aa14.25□□□□□ -0.13
VARS-216ENST00000428445 LOC102725191A0A1B0GVB3 256 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 ZNF99A8MXY4 864 aaPredicted RBP14.24□□□□□ -0.13
VARS-216ENST00000428445 FAM157AC9JC47 383 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 AIM2O14862 343 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 FZD7O75084 574 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 ERCC1P07992 297 aaPredicted RBP14.24□□□□□ -0.13
VARS-216ENST00000428445 PATE4P0C8F1 98 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 POLR2JP52435 117 aaKnown RBP14.24□□□□□ -0.13
VARS-216ENST00000428445 FADDQ13158 208 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 ALKBH6Q3KRA9 238 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 H1FNTQ75WM6 255 aaPredicted RBP14.24□□□□□ -0.13
VARS-216ENST00000428445 C20orf196Q8IYI0 205 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 IL17RDQ8NFM7 739 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 RNF217Q8TC41 542 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 HPS1Q92902 700 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 PAIP1Q9H074 479 aaKnown RBP14.24□□□□□ -0.13
VARS-216ENST00000428445 METTL17Q9H7H0 456 aaPredicted RBP14.24□□□□□ -0.13
VARS-216ENST00000428445 REV1Q9UBZ9 1251 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 USP22Q9UPT9 525 aa14.24□□□□□ -0.13
VARS-216ENST00000428445 TENM1Q9UKZ4 2725 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 CLIC1O00299 241 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 UBDO15205 165 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 BMP2P12643 396 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 ZNF35P13682 527 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 ETS2P15036 469 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 PTDSS1P48651 473 aaKnown RBP14.23□□□□□ -0.13
VARS-216ENST00000428445 RUNX1T1Q06455 604 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 CAMK2DQ13557 499 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 FAM69AQ5T7M9 428 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 THSD4Q6ZMP0 1018 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 ZNF813Q6ZN06 617 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 UEVLDQ8IX04 471 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 LSMEM1Q8N8F7 131 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 PIK3C3Q8NEB9 887 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 CLDND2Q8NHS1 167 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 NFKBIDQ8NI38 313 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 FGFBP3Q8TAT2 258 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 GTF2H4Q92759 462 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 YIPF5Q969M3 257 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 MRPL24Q96A35 216 aaKnown RBP14.23□□□□□ -0.13
VARS-216ENST00000428445 MOGAT1Q96PD6 335 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 TREM2Q9NZC2 230 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 ZNF224Q9NZL3 707 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 SLAMF8Q9P0V8 285 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 KLHL14Q9P2G3 628 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 METRNQ9UJH8 293 aa14.23□□□□□ -0.13
VARS-216ENST00000428445 TRAV36DV7A0A075B6V5 113 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 TMEM120BA0PK00 339 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 SERPINI2O75830 405 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 NAT2P11245 290 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 B4GALT1P15291 398 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 NQO1P15559 274 aaKnown RBP14.22□□□□□ -0.13
VARS-216ENST00000428445 ZNF14P17017 642 aaPredicted RBP14.22□□□□□ -0.13
VARS-216ENST00000428445 CFPP27918 469 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 DVL1P1P54792 670 aaPredicted RBP14.22□□□□□ -0.13
VARS-216ENST00000428445 MFSD13AQ14CX5 517 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 GSG1Q2KHT4 349 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 ALG10BQ5I7T1 473 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 C6orf89Q6UWU4 347 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 NHLRC1Q6VVB1 395 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 C12orf54Q6X4T0 127 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 MIER2Q8N344 545 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 SLC38A4Q969I6 547 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 PLA2G12AQ9BZM1 189 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 A4GALTQ9NPC4 353 aa14.22□□□□□ -0.13
VARS-216ENST00000428445 A0A087WUJ7 227 aa14.21□□□□□ -0.13
VARS-216ENST00000428445 SYNGR3O43761 229 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms