RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MCIDASD6RGH6 385 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 J3KTA2 159 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ARPC2O15144 300 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 UPK3AO75631 287 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ZNF432O94892 652 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 HPRP00739 348 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 NR2C1P13056 603 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 IFNGR1P15260 489 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 PTAFRP25105 342 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 MSX2P35548 267 aaPredicted RBP12.93□□□□□ -0.34
CHD1-202ENST00000414220 SLC9A3P48764 834 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 DAP3P51398 398 aaKnown RBP12.93□□□□□ -0.34
CHD1-202ENST00000414220 DNAL1Q4LDG9 190 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ANKRD16Q6P6B7 361 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ZNF704Q6ZNC4 412 aaPredicted RBP12.93□□□□□ -0.34
CHD1-202ENST00000414220 C20orf204Q6ZNR8 217 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 C22orf34Q6ZV56 151 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 DHFR2Q86XF0 187 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 CCDC36Q8IYA8 594 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 LRRC17Q8N6Y2 441 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 PFN4Q8NHR9 129 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 PIGTQ969N2 578 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ZNF566Q969W8 418 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 LRGUKQ96M69 825 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 OR2M2Q96R28 347 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ZNF347Q96SE7 839 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 PLEKHF2Q9H8W4 249 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 UBTD1Q9HAC8 227 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 NMNAT1Q9HAN9 279 aaPredicted RBP12.93□□□□□ -0.34
CHD1-202ENST00000414220 SLC17A5Q9NRA2 495 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 TAS2R5Q9NYW4 299 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 ACTR3BQ9P1U1 418 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 POFUT2Q9Y2G5 429 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 RNF115Q9Y4L5 304 aa12.93□□□□□ -0.34
CHD1-202ENST00000414220 A0A1W2PRQ8 180 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 EFCAB9A8MZ26 197 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 M0R3G1 203 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 GYG2O15488 501 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 CLOCKO15516 846 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 FABP3P05413 133 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 HLA-DOBP13765 273 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 CSNK1A1P48729 337 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 RASSF2P50749 326 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 BIDP55957 195 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 PRKCDQ05655 676 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 DGCR6Q14129 220 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 TRIM25Q14258 630 aaKnown RBP12.92□□□□□ -0.34
CHD1-202ENST00000414220 ACKR1Q16570 336 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 FGD3Q5JSP0 725 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 RINLQ6ZS11 566 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
CHD1-202ENST00000414220 NRMQ8IXM6 262 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 C20orf196Q8IYI0 205 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 OR1K1Q8NGR3 316 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 OR6X1Q8NH79 312 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 MAGEE2Q8TD90 523 aaPredicted RBP12.92□□□□□ -0.34
CHD1-202ENST00000414220 SLC25A44Q96H78 314 aaPredicted RBP12.92□□□□□ -0.34
CHD1-202ENST00000414220 BOD1Q96IK1 185 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 TXNDC15Q96J42 360 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 PIP5K1AQ99755 562 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 EMC6Q9BV81 110 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 ULBP2Q9BZM5 246 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 TRIM15Q9C019 465 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 CRLF2Q9HC73 371 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 GPR35Q9HC97 309 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 INIPQ9NRY2 104 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 C20orf141Q9NUB4 165 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 MED29Q9NX70 200 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 SLC25A15Q9Y619 301 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 V9GYQ6 96 aa12.92□□□□□ -0.34
CHD1-202ENST00000414220 CENPBD1B2RD01 187 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 IGHG1P01857 330 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 T-ENOLP0DO92 83 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 IFNGR2P38484 337 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 FOXG1P55316 489 aaPredicted RBP12.91□□□□□ -0.34
CHD1-202ENST00000414220 CLRN1P58418 232 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 RPL18Q07020 188 aaKnown RBP12.91□□□□□ -0.34
CHD1-202ENST00000414220 CAMK2DQ13557 499 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 CEACAM16Q2WEN9 425 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 TBRG1Q3YBR2 411 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 ALG10Q5BKT4 473 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 OAFQ86UD1 273 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 TMEM123Q8N131 208 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 KCNS3Q9BQ31 491 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 THTPAQ9BU02 230 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 TAS2R1Q9NYW7 299 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 NDUFAF4Q9P032 175 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 TMCC3Q9ULS5 477 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 AURKCQ9UQB9 309 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 PLEKHA6Q9Y2H5 1048 aa12.91□□□□□ -0.34
CHD1-202ENST00000414220 A0A087WUU8 490 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 ZNF99A8MXY4 864 aaPredicted RBP12.9□□□□□ -0.34
CHD1-202ENST00000414220 M0R1B8 84 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms