RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SSX4O60224 188 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 OR6A2O95222 327 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 MT-ATP6P00846 226 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
SDF4-203ENST00000403997 APOBEC3AP31941 199 aaPredicted RBP11.61□□□□□ -0.55
SDF4-203ENST00000403997 POU3F1Q03052 451 aaPredicted RBP11.61□□□□□ -0.55
SDF4-203ENST00000403997 PUDPQ08623 228 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 RAB35Q15286 201 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 CEACAM16Q2WEN9 425 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 COQ5Q5HYK3 327 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 C11orf71Q6IPW1 123 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 WDR88Q6ZMY6 472 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 CALHM3Q86XJ0 350 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 PCYOX1LQ8NBM8 494 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 PROX1Q92786 737 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 ZNF837Q96EG3 531 aaPredicted RBP11.61□□□□□ -0.55
SDF4-203ENST00000403997 TXNDC15Q96J42 360 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 ZNF317Q96PQ6 595 aaPredicted RBP11.61□□□□□ -0.55
SDF4-203ENST00000403997 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 CAPN7Q9Y6W3 813 aa11.61□□□□□ -0.55
SDF4-203ENST00000403997 SLC35F4A4IF30 521 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 ZNF726A6NNF4 738 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 C11orf98E9PRG8 122 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 SERPINI2O75830 405 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 LYPD3O95274 346 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 CH25HO95992 272 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 CRYAAP02489 173 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 THY1P04216 161 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 HIST1H2ABP04908 130 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 ADORA3P0DMS8 318 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 BMP4P12644 408 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 CRYBA2P53672 197 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 CHRNB3Q05901 458 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 PHYHD1Q5SRE7 291 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 ERICH5Q6P6B1 374 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 NHLRC1Q6VVB1 395 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 HIST3H2AQ7L7L0 130 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 PXKQ7Z7A4 578 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 CARM1Q86X55 608 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 C20orf196Q8IYI0 205 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 MAPK1IP1LQ8NDC0 245 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 OR5J2Q8NH18 312 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 C10orf82Q8WW14 230 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 HIST1H2ACQ93077 130 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 LRR1Q96L50 414 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 ZNF583Q96ND8 569 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 KATNB1Q9BVA0 655 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 NELFAQ9H3P2 528 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 MOV10Q9HCE1 1003 aaKnown RBP11.6□□□□□ -0.55
SDF4-203ENST00000403997 B3GAT2Q9NPZ5 323 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 MED29Q9NX70 200 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 USP22Q9UPT9 525 aa11.6□□□□□ -0.55
SDF4-203ENST00000403997 KPNA4O00629 521 aaPredicted RBP11.59□□□□□ -0.55
SDF4-203ENST00000403997 IFNA14P01570 189 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 CECR9P0C854 216 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 CBR1P16152 277 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 TNFRSF1BP20333 461 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 PCSK6P29122 969 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 MDH1P40925 334 aaKnown RBP11.59□□□□□ -0.55
SDF4-203ENST00000403997 CAPZA2P47755 286 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 NUDT6P53370 316 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 CAMK2DQ13557 499 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 ZNF74Q16587 644 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 TSPYL5Q86VY4 417 aaPredicted RBP11.59□□□□□ -0.55
SDF4-203ENST00000403997 FAM169BQ8N8A8 192 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 OR6N1Q8NGY5 312 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 HTRA1Q92743 480 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 RHNO1Q9BSD3 238 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 PCDHAC1Q9H158 963 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 MED4Q9NPJ6 270 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 NANSQ9NR45 359 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 ARMCX1Q9P291 453 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 CRNNQ9UBG3 495 aaPredicted RBP11.59□□□□□ -0.55
SDF4-203ENST00000403997 BAG5Q9UL15 447 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 POFUT2Q9Y2G5 429 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 PMF1-BGLAPU3KQ54 211 aa11.59□□□□□ -0.55
SDF4-203ENST00000403997 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 HIVEP2P31629 2446 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
SDF4-203ENST00000403997 SLC22A2O15244 555 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 SHOX2O60902 331 aaPredicted RBP11.58□□□□□ -0.56
SDF4-203ENST00000403997 SEC14L2O76054 403 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 IGLV1-44P01699 117 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 UMPSP11172 480 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 IFNGR1P15260 489 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 BIDP55957 195 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 TAS2R41P59536 307 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 NAAAQ02083 359 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 ZP4Q12836 540 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 VHLLQ6RSH7 139 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 DEF8Q6ZN54 512 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 CCDC36Q8IYA8 594 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 LRRC17Q8N6Y2 441 aa11.58□□□□□ -0.56
SDF4-203ENST00000403997 POU5F2Q8N7G0 328 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms