RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 WDR20Q8TBZ3 569 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 HMGB4Q8WW32 186 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 GRAMD2BQ96HH9 432 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 AQP10Q96PS8 301 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 GRIN2AQ12879 1464 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MYOCOSA0A1B0GUC4 107 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 BLACEA4D250 179 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 J3KR12 359 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 IL13P35225 146 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 TCL1AP56279 114 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 FBXL16Q8N461 479 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 SH3YL1Q96HL8 342 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MS4A10Q96PG2 267 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 RXRBP28702 533 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 OR8B8Q15620 311 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 CMC1Q7Z7K0 106 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 NAGSQ8N159 534 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 OR2AE1Q8NHA4 323 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 TCTN2Q96GX1 697 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 RNF181Q9P0P0 153 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 SPATA31A6Q5VVP1 1343 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 ARAP3Q8WWN8 1544 aa8.02□□□□□ -1.12
CACNA1C-220ENST00000399655 GABRR3A8MPY1 467 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 CLIC3O95833 236 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 MS4A2Q01362 244 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 NXNL2Q5VZ03 156 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 DTWD1Q8N5C7 304 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 C2orf15Q8WU43 125 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM216AQ8WUB2 273 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 TTC9Q92623 222 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ISG20Q96AZ6 181 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 LYSMD1Q96S90 227 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PLEKHA2Q9HB19 425 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ADCY10Q96PN6 1610 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ELOA3CA0A087WX78 387 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PM20D1Q6GTS8 502 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC16A14Q7RTX9 510 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 TXNRD3Q86VQ6 643 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 CLEC1AQ8NC01 280 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC45A3Q96JT2 553 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 TPSD1Q9BZJ3 242 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SEMA4GQ9NTN9 838 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ZFP30Q9Y2G7 519 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR4F21O95013 312 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ARP10275 920 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 LBX2Q6XYB7 198 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ACOT4Q8N9L9 421 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PCNPQ8WW12 178 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 TSGA13Q96PP4 275 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 BARHL1Q9BZE3 327 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 HSPB2A8KAH6 182 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 NKX2-5P52952 324 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR1C1Q15619 314 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 HSPB2Q16082 182 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ACSM6Q6P461 480 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 TMIGD1Q6UXZ0 262 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PRSS35Q8N3Z0 413 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR10X1Q8NGY0 326 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC25A33Q9BSK2 321 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 A0A087X0M5 115 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 A0A1B0GX30 115 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 TMX2-CTNND1H3BSU7 103 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 IGHEP01854 428 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 HTR1FP30939 366 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 BPIFB2Q8N4F0 458 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 CLRN3Q8NCR9 226 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 DBF4BQ8NFT6 615 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR6K3Q8NGY3 331 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 VRTNQ9H8Y1 702 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 KIR2DS1A0A191URI9 304 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 A0A1W2PPQ1 181 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 GUSBP08236 651 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 KIR2DS4P43632 304 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 CDK5R2Q13319 367 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 KIR2DS1Q14954 304 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 HHIPL2Q6UWX4 724 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR51A4Q8NGJ6 313 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR51A7Q8NH64 312 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 VN1R17PQ8TDU5 208 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SECTM1Q8WVN6 248 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 OR2D2Q9H210 308 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC17A7Q9P2U7 560 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF785A8K8V0 405 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 CACNG7P62955 275 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC35E4Q6ICL7 350 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 SORBS1Q9BX66 1292 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 KCNMB3Q9NPA1 279 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 MRPS2Q9Y399 296 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 GPR75-ASB3A0A0A6YYF3 556 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 DUX1O43812 170 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 AOC1P19801 751 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 FBLP22087 321 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 ATP4BP51164 291 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 PPP1R8Q12972 351 aaKnown RBP8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 AGBL4Q5VU57 503 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 IL22RA1Q8N6P7 574 aa8.02□□□□□ -1.13
CACNA1C-220ENST00000399655 CERKQ8TCT0 537 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms