RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ARIH2OSQ8N7S6 290 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 UCN2Q96RP3 112 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 LHX6Q9UPM6 363 aa24.59■■□□□ 1.53
CPNE1-203ENST00000397442 TRGV5A0A0B4J1U4 118 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 LOC102725191A0A1B0GVB3 256 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 A0A1W2PRG6 482 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 OR6C68A6NDL8 312 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 NPIPB13A6NJU9 1138 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 NPIPB4C9JG80 1138 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 PRR23D1E9PI22 279 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-203ENST00000397442 WISP2O76076 250 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 ACTL6AO96019 429 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 PRR23D2P0DMB1 279 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-203ENST00000397442 EEF1B2P24534 225 aaKnown RBP24.58■■□□□ 1.53
CPNE1-203ENST00000397442 POU3F1Q03052 451 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF91Q05481 1191 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 LINC00303Q3SY05 128 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 PLEKHN1Q494U1 663 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-203ENST00000397442 ARMC4Q5T2S8 1044 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 AHSA2Q719I0 299 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 SIGLEC11Q96RL6 698 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 TSPAN10Q9H1Z9 355 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-203ENST00000397442 SPRR3Q9UBC9 169 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 SCOCQ9UIL1 159 aa24.58■■□□□ 1.53
CPNE1-203ENST00000397442 BOD1L1Q8NFC6 3051 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 IGHV3-15A0A0B4J1V0 119 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 TRIM64CA6NLI5 447 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 CXCL13O43927 109 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 DBTP11182 482 aaKnown RBP24.57■■□□□ 1.52
CPNE1-203ENST00000397442 ENPP1P22413 925 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 ACVR2AP27037 513 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 BCL2A1Q16548 175 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 RPUSD3Q6P087 351 aaKnown RBP24.57■■□□□ 1.52
CPNE1-203ENST00000397442 NIPAL3Q6P499 406 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 SIAH3Q8IW03 269 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 WDFY1Q8IWB7 410 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 OXGR1Q96P68 337 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 NMNAT2Q9BZQ4 307 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 LDAHQ9H6V9 325 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 ERVK-18Q9QC07 812 aa24.57■■□□□ 1.52
CPNE1-203ENST00000397442 SMAD9O15198 467 aaKnown RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 CLUP10909 449 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 IFNGR1P15260 489 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 SLC2A5P22732 501 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 EIF1AXP47813 144 aaKnown RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 TMEM225Q6GV28 225 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 LEG1Q6P5S2 330 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 IPCEF1Q8WWN9 437 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 OTULINQ96BN8 352 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 CRELD1Q96HD1 420 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 RPL36Q9Y3U8 105 aaKnown RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 NOX1Q9Y5S8 564 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 TRAF3IP2O43734 574 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 ATP6V1B1P15313 513 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 ACVR1BP36896 505 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 CDH11P55287 796 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 BLMHQ13867 455 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 MELKQ14680 651 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 ZNF773Q6PK81 442 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 SLC35D2Q76EJ3 337 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 JAZF1Q86VZ6 243 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 GHDCQ8N2G8 530 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 ASB10Q8WXI3 467 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 ZNF845Q96IR2 970 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 TXNDC15Q96J42 360 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 NAA11Q9BSU3 229 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 MED29Q9NX70 200 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 CNOT2Q9NZN8 540 aaKnown RBP24.56■■□□□ 1.52
CPNE1-203ENST00000397442 TNFRSF10DQ9UBN6 386 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 RASD1Q9Y272 281 aa24.56■■□□□ 1.52
CPNE1-203ENST00000397442 FAM87AP0C7U9 286 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 PAICSP22234 425 aaKnown RBP24.55■■□□□ 1.52
CPNE1-203ENST00000397442 HTR1FP30939 366 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 MVKQ03426 396 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 SRYQ05066 204 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 RUNX1T1Q06455 604 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 GPAT4Q86UL3 456 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 GID4Q8IVV7 300 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 UEVLDQ8IX04 471 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 OR9Q1Q8NGQ5 310 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 RFKQ969G6 155 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 TIMP4Q99727 224 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 COPS4Q9BT78 406 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 MRPS26Q9BYN8 205 aaKnown RBP24.55■■□□□ 1.52
CPNE1-203ENST00000397442 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.55■■□□□ 1.52
CPNE1-203ENST00000397442 ZZEF1O43149 2961 aa24.55■■□□□ 1.52
CPNE1-203ENST00000397442 A0A087WXM4 84 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 CCDC182A6NF36 153 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 ADRA2AP08913 450 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 PIPP12273 146 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-203ENST00000397442 MEPCEQ7L2J0 689 aaKnown RBP24.54■■□□□ 1.52
CPNE1-203ENST00000397442 EXD3Q8N9H8 876 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 KISS1RQ969F8 398 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-203ENST00000397442 ZHX1-C8orf76Q96EF9 292 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 EXO5Q9H790 373 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 MRPS18AQ9NVS2 196 aaKnown RBP24.54■■□□□ 1.52
CPNE1-203ENST00000397442 H2AFY2Q9P0M6 372 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-203ENST00000397442 KLHL13Q9P2N7 655 aa24.54■■□□□ 1.52
CPNE1-203ENST00000397442 A0A1B0GVC2 190 aa24.53■■□□□ 1.52
CPNE1-203ENST00000397442 EFCAB10A6NFE3 127 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms