RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 FAM60AQ9NP50 221 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ADAP2Q9NPF8 381 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 C11orf16Q9NQ32 467 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 SLC22A11Q9NSA0 550 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ZCCHC3Q9NUD5 404 aaKnown RBP4.9□□□□□ -1.63
VPS41-203ENST00000395969 C2orf42Q9NWW7 574 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 CTSFQ9UBX1 484 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ERVK-19Q9WJR5 959 aa4.9□□□□□ -1.63
VPS41-203ENST00000395969 ARID1BQ8NFD5 2236 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 A0A1B0GVC2 190 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 A6NIN4 97 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 ARPC3O15145 178 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 DUX1O43812 170 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 EIF4E2O60573 245 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 TSPAN2O60636 221 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 NCR1O76036 304 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 RGS11O94810 467 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 DDAH2O95865 285 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 BCHEP06276 602 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CT45A8P0DMV1 189 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CT45A9P0DMV2 189 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OR12D1P0DN82 309 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 IL9P15248 144 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 FKBP2P26885 142 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 AQP1P29972 269 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CCKBRP32239 447 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 MC3RP41968 323 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 GIPRP48546 466 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SLC37A1P57057 533 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 CT45A2Q5DJT8 189 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 DCST1Q5T197 706 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 COX15Q7KZN9 410 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SHFQ7M4L6 423 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 BCDIN3DQ7Z5W3 292 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 ADCK2Q7Z695 626 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OAFQ86UD1 273 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CCDC36Q8IYA8 594 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 BEST4Q8NFU0 473 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OR9A2Q8NGT5 310 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OR10G6Q8NH81 332 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 MOSPD2Q8NHP6 518 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 COQ8AQ8NI60 647 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SLC7A13Q8TCU3 470 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 NSMAFQ92636 917 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 TAAR9Q96RI9 348 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 DMRTA2Q96SC8 542 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 MNTQ99583 582 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SLC38A3Q99624 504 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 NMNAT2Q9BZQ4 307 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 TRIM2Q9C040 744 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OSGEPL1Q9H4B0 414 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 PDE7BQ9NP56 450 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 BABAM2Q9NXR7 383 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 DNAJB12Q9NXW2 375 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 GPR160Q9UJ42 338 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 FBXL2Q9UKC9 423 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SCN2AQ99250 2005 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 LOC102725191A0A1B0GVB3 256 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 D6RAR5 112 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 BHLHE40O14503 412 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CHST10O43529 356 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 HYAL3O43820 417 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 SLC28A2O43868 658 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 F12P00748 615 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 OPN1SWP03999 348 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CELA2BP08218 269 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 POU3F2P20265 443 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 FEN1P39748 380 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 SLC6A8P48029 635 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 RAB13P51153 203 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SNRPNP63162 240 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 DDX39BQ13838 428 aaKnown RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 NR0B2Q15466 257 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SYPL1Q16563 259 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 DUSP5Q16690 384 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 MICBQ29980 383 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SYT14P1Q58G82 188 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OR2G6Q5TZ20 316 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CDCP2Q5VXM1 449 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SLC30A6Q6NXT4 461 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 LYPD4Q6UWN0 246 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 ZNF620Q6ZNG0 422 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 TAF8Q7Z7C8 310 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 ZER1Q7Z7L7 766 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 NR2C2APQ86WQ0 139 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 LRRC75AQ8NAA5 344 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 TMEM52Q8NDY8 209 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 OR52N1Q8NH53 320 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 SPSB2Q99619 263 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 CHIAQ9BZP6 476 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 LAT2Q9GZY6 243 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 METTL17Q9H7H0 456 aaPredicted RBP4.89□□□□□ -1.63
VPS41-203ENST00000395969 SH2D2AQ9NP31 389 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 EQTNQ9NQ60 294 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 PIPOXQ9P0Z9 390 aa4.89□□□□□ -1.63
VPS41-203ENST00000395969 ASH2LQ9UBL3 628 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms