RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ZNF3P17036 446 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 NDUFS1P28331 727 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 PRKAR1BP31321 381 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 RUNX3Q13761 415 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 FAM53BQ14153 422 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 ZIC1Q15915 447 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 C2orf68Q2NKX9 166 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 YOD1Q5VVQ6 348 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 SEZ6L2Q6UXD5 910 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 EIF4E3Q8N5X7 224 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 PHOSPHO1Q8TCT1 267 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 MICU1Q9BPX6 476 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 APOOQ9BUR5 198 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 NOX4Q9NPH5 578 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 NPDC1Q9NQX5 325 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 MED11Q9P086 117 aa11.42□□□□□ -0.58
PRPF40B-202ENST00000380281 SYT5O00445 386 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 BHLHE40O14503 412 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 SERPINA3P01011 423 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 MAS1P04201 325 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 RLN1P04808 185 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 SQSTM1Q13501 440 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 AMZ1Q400G9 498 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 MANEAQ5SRI9 462 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 SLC25A30Q5SVS4 291 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 TMEM64Q6YI46 380 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 FAM174AQ8TBP5 190 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 TOX2Q96NM4 488 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 CCDC3Q9BQI4 270 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 ZNF251Q9BRH9 671 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 KCNK15Q9H427 330 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 PRMT8Q9NR22 394 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 IKZF2Q9UKS7 526 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 RCBTB2O95199 551 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 F13BP05160 661 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 MTNR1BP49286 362 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 CAPZA1P52907 286 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 GID4Q8IVV7 300 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 OR52R1Q8NGF1 315 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 OR9A4Q8NGU2 314 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 OR52I2Q8NH67 350 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 KISS1RQ969F8 398 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 WDR77Q9BQA1 342 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 ADGRL4Q9HBW9 690 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 KRCC1Q9NPI7 259 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 SIGLEC7Q9Y286 467 aa11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 EXOGQ9Y2C4 368 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-202ENST00000380281 PMS2P1A4D2B8 440 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 EFCAB7A8K855 629 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 C17orf51A8MQB3 221 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 H0YGG7 62 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 TBX19O60806 448 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 PRAMEF2O60811 474 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 SNAPINO95295 136 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 OR8G3PP0DMU2 310 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 APEHP13798 732 aaKnown RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 EPHA4P54764 986 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 ARF3P61204 181 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 UBE2IP63279 158 aaKnown RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 C9orf152Q5JTZ5 239 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 STPG1Q5TH74 334 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 B3GNTL1Q67FW5 361 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 PRSS58Q8IYP2 241 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 OR8S1Q8NH09 359 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 THAP6Q8TBB0 222 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 PELI1Q96FA3 418 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 SPACA7Q96KW9 195 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 LMF1Q96S06 567 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 ELF4Q99607 663 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 FLRT3Q9NZU0 649 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 DTX4Q9Y2E6 619 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 UNC13CQ8NB66 2214 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 SLC22A31A6NKX4 558 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 SULT1C2O00338 296 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 TXNL1O43396 289 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 CA3P07451 260 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 TMIGD3P0DMS9 266 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 PSMB1P20618 241 aaKnown RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 RPS15P62841 145 aaKnown RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 KLF9Q13886 244 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 MLC1Q15049 377 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 METTL11BQ5VVY1 283 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 FIGLAQ6QHK4 219 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 APOOLQ6UXV4 268 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 IL17RCQ8NAC3 791 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 SFXN5Q8TD22 340 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 RXFP4Q8TDU9 374 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 FAM3CQ92520 227 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 TEX101Q9BY14 249 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 DAPP1Q9UN19 280 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 FAM186AA6NE01 2351 aa11.4□□□□□ -0.58
PRPF40B-202ENST00000380281 LY86O95711 162 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms