RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RAB40BQ12829 278 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 CNTN1Q12860 1018 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PNLIPRP3Q17RR3 467 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PLEKHS1Q5SXH7 462 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PLPP4Q5VZY2 271 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 DEFB128Q7Z7B8 93 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MRPL43Q8N983 215 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 SLC24A4Q8NFF2 622 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ZCCHC10Q8TBK6 192 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MRPS18AQ9NVS2 196 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PTGFRNQ9P2B2 879 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 EXOSC1Q9Y3B2 195 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 OARD1Q9Y530 152 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 TRBV4-1A0A0J9YWV2 114 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3BA6NDS4 549 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 OR52A4PA6NMU1 304 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MAGEB17A8MXT2 336 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 CDRT15L2A8MXV6 281 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 CD160O95971 181 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ADAP00813 363 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 CD74P04233 296 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 SERPIND1P05546 499 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 C8AP07357 584 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 SNRPBP14678 240 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MC4RP32245 332 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 RPIAP49247 311 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 CAV2P51636 162 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 GGTA1PQ4G0N0 100 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 GLT8D1Q68CQ7 371 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 TBC1D3GQ6DHY5 549 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 C11orf88Q6PI97 169 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 VHLLQ6RSH7 139 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 SMARCD3Q6STE5 483 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 UNQ6126/PRO20091Q6UXV3 157 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF620Q6ZNG0 422 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 GPSM1Q86YR5 675 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ETFBKMTQ8IXQ9 262 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MMP21Q8N119 569 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 OR52I2Q8NH67 350 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PIGXQ8TBF5 258 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 LINGO1Q96FE5 620 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 THOC3Q96J01 351 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PLEKHA1Q9HB21 404 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 LANCL2Q9NS86 450 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 KLK11Q9UBX7 282 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 A0A1W2PPQ1 181 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF724A8MTY0 619 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 TCF21O43680 179 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 FGF7P21781 194 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 NME2P22392 152 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 GALP22466 123 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 MAS1LP35410 378 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ARHGAP19Q14CB8 494 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 FAM189A2Q15884 450 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 RPE65Q16518 533 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF791Q3KP31 576 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 C1orf185Q5T7R7 199 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 OLFML2AQ68BL7 652 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PGBD2Q6P3X8 592 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PEG10Q86TG7 708 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 CCDC107Q8WV48 283 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 AKR1E2Q96JD6 320 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 BHLHE41Q9C0J9 482 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 FAM120CQ9NX05 1096 aaKnown RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 TNRC18O15417 2968 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 A0A0U1RQV5 110 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 A0A1W2PPE2 198 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CPED1A4D0V7 1026 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF587BE7ETH6 402 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 F5H0A9 414 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 LEFTY2O00292 366 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 MFNGO00587 321 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CD5P06127 495 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CKMP06732 381 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF888P0CJ79 500 aaPredicted RBP6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PRPH2P23942 346 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ACRV1P26436 265 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 FZD5Q13467 585 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 GTF2H2Q13888 395 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SLC9A5Q14940 896 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 LY6G6FQ5SQ64 297 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SLC25A30Q5SVS4 291 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 GTF2H2CQ6P1K8 395 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SERPINA13PQ6UXR4 307 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HEPN1Q6WQI6 88 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 GAREM2Q75VX8 874 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 SLC35F3Q8IY50 421 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CMTM8Q8IZV2 173 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 NAXEQ8NCW5 288 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 NUDCD2Q8WVJ2 157 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 MYEOVQ96EZ4 313 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 HRH4Q9H3N8 390 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 IPPKQ9H8X2 491 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 ARL5AQ9Y689 179 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
CDKL5-201ENST00000379989 PPP1R2P9O14990 202 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms