RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TMEM69Q5SWH9 247 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF660Q6AZW8 331 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZCCHC12Q6PEW1 402 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 FAM122BQ7Z309 247 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR2L3Q8NG85 312 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR11G2Q8NGC1 345 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 MOAP1Q96BY2 351 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 DNAJA3Q96EY1 480 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 PELI1Q96FA3 418 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRSS27Q9BQR3 290 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 FKRPQ9H9S5 495 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 HRASLSQ9HDD0 168 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM138Q9NPI0 162 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 TAS2R10Q9NYW0 307 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 DHCR7Q9UBM7 475 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC35A3Q9Y2D2 325 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 DENND4CQ5VZ89 1909 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CACNA1IQ9P0X4 2223 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A087WV48 116 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 EDDM13A0A1B0GTR0 161 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 ICOSLGO75144 302 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CDC123O75794 336 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADH1CP00326 375 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 EPCAMP16422 314 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 NDUFB7P17568 137 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 AK4P27144 223 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 HOXA6P31267 233 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 PPM1AP35813 382 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CD96P40200 585 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 TSPAN7P41732 249 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CCR9P51686 369 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 FABP9Q0Z7S8 132 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 NNATQ16517 81 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 C4orf46Q504U0 113 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 DNAAF1Q8NEP3 725 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR10G6Q8NH81 332 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 BRIX1Q8TDN6 353 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 STK35Q8TDR2 534 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 TCTEX1D2Q8WW35 142 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CPNE4Q96A23 557 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 C7orf50Q9BRJ6 194 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CES1P1Q9UKY3 287 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CAMK2AQ9UQM7 478 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 NPFFR2Q9Y5X5 522 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CXorf51AA0A1B0GTR3 108 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM218A2RU14 115 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 GALR3O60755 368 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 LILRB3O75022 631 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 CISD3P0C7P0 127 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ERGP11308 486 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 HIST1H1CP16403 213 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 GALP22466 123 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 MST1P26927 711 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 GABRA3P34903 492 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 SIRPAP78324 504 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 KLF9Q13886 244 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 HABP2Q14520 560 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 MELKQ14680 651 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 AKIRIN2Q53H80 203 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 EIPR1Q53HC9 387 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 DCST2Q5T1A1 773 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 DMKNQ6E0U4 476 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ARMC10Q8N2F6 343 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 HDDC3Q8N4P3 179 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 BOLLQ8N9W6 283 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR4K14Q8NGD5 310 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 SMIM4Q8WVI0 70 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 FCAMRQ8WWV6 532 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF681Q96N22 645 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 NKX3-1Q99801 234 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 CFHR5Q9BXR6 569 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 RNF208Q9H0X6 261 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 TSPAN10Q9H1Z9 355 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 IL21RQ9HBE5 538 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM27Q9HBJ8 222 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 MEPEQ9NQ76 525 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 EXOSC3Q9NQT5 275 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 PIPOXQ9P0Z9 390 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF346Q9UL40 294 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 SIGLEC7Q9Y286 467 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 IER3IP1Q9Y5U9 82 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 PLXNA2O75051 1894 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF879B4DU55 563 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 C1QTNF3-AMACRE9PGA6 284 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 CREBL2O60519 120 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRAF2O60831 178 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 SNRNP200O75643 2136 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 AQP8O94778 261 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 IGF2P01344 180 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 IFNGP01579 166 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 ATP1B1P05026 303 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 HEXBP07686 556 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 MUC1P15941 1255 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 NDUFS1P28331 727 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 DCDP81605 110 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 SHC2P98077 582 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 TRAM1Q15629 374 aa7.55□□□□□ -1.2
CDC42SE1-201ENST00000357235 LINC00303Q3SY05 128 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms