RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SLC35D1Q9NTN3 355 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MRPS2Q9Y399 296 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF814B7Z6K7 855 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 BMP2P12643 396 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 UBE2G1P62253 170 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 KIRREL1Q96J84 757 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF597Q96LX8 424 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 NME4O00746 187 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 FRMD1Q8N878 549 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 UBAC2Q8NBM4 344 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OR5B3Q8NH48 314 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ARRDC3Q96B67 414 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 CNOT2Q9NZN8 540 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 GABRPO00591 440 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 TPOP07202 933 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ELLP55199 621 aaPredicted RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OR13C2Q8NGS9 318 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ACTL7AQ9Y615 435 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 Q1RN00 199 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 C19orf47Q8N9M1 422 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 SLC35E1Q96K37 410 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MBOAT4Q96T53 435 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 RNF32Q9H0A6 362 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 GAREM2Q75VX8 874 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 NHLRC2Q8NBF2 726 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 FCRL1Q96LA6 429 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ESPL1Q14674 2120 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 F10P00742 488 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OR8G3PP0DMU2 310 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 RAB33AQ14088 237 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 PNPLA1Q8N8W4 532 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ZBED3Q96IU2 234 aaPredicted RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MFSD12Q6NUT3 480 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MRPS28Q9Y2Q9 187 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ATP23Q9Y6H3 246 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF623O75123 536 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 PENKP01210 267 aaPredicted RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 DHRS4L1P0CG22 281 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ELK1P19419 428 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 EMP3P54852 163 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 GPLD1P80108 840 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ARL2-SNX15V9GYD0 113 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 BIDP55957 195 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 TAZQ16635 292 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 BTNL8Q6UX41 500 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ACPTQ9BZG2 426 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OSGIN1Q9UJX0 560 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 PIGLQ9Y2B2 252 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MLLT11Q13015 90 aaPredicted RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 C18orf63Q68DL7 685 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 TMEFF1Q8IYR6 380 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OR10G3Q8NGC4 313 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OR2J3O76001 311 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 TXNDC12O95881 172 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 SLC7A5P1Q8MH63 180 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 MDGA1Q8NFP4 955 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 OR10J5Q8NHC4 309 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 WDR76Q9H967 626 aa5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 INTS6Q9UL03 887 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-201ENST00000355086 ABCD4O14678 606 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 OPRD1P41143 372 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 DPPA4Q7L190 304 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 ALG12Q9BV10 488 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 NUP214P35658 2090 aaPredicted RBP5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 CABIN1Q9Y6J0 2220 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 GPR75O95800 540 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 SELEP16581 610 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 NAGAP17050 411 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 MAT1AQ00266 395 aaKnown RBP5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 NPWQ8N729 165 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 TIMM29Q9BSF4 260 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 MED20Q9H944 212 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 NOX4Q9NPH5 578 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 NECAP2Q9NVZ3 263 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 DCAF16Q9NXF7 216 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 SLIT2O94813 1529 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 ZNF691Q5VV52 312 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 LMNTD1Q8N9Z9 388 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 TRIB1Q96RU8 372 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 PRAMEF25A6NGN4 478 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 DFFBO76075 338 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 PVRP15151 417 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 GMPRP36959 345 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 KCNJ10P78508 379 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 OR5I1Q13606 314 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 RTP2Q5QGT7 225 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 PRAMEF5Q5TYX0 476 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 PRAMEF6Q5VXH4 476 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 RNF141Q8WVD5 230 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 SEC22AQ96IW7 307 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 S1PR3Q99500 378 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 CLCF1Q9UBD9 225 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 MT-ND4LP03901 98 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 MFAP5Q13361 173 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 GTDC1Q4AE62 458 aa5.36□□□□□ -1.55
SRGAP1-201ENST00000355086 HSD11B1LQ7Z5J1 315 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms