RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TMED7Q9Y3B3 224 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SPAG17Q6Q759 2223 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 KIAA1217Q5T5P2 1943 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TLCD2A6NGC4 264 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 C1QCP02747 245 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 JMJD7P0C870 316 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 HTR2CP28335 458 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 KIR2DL3P43628 341 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 COX15Q7KZN9 410 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CCDC71Q8IV32 467 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 OR4Q3Q8NH05 313 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 OR14A16Q8NHC5 309 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 FGF14Q92915 247 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF160Q9HCG1 818 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ANKRD34BA5PLL1 514 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 POM121CA8CG34 1229 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 MTRF1O75570 445 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 HOXB3P14651 431 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 NFYAP23511 347 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 BTG2P78543 158 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 MEF2DQ14814 521 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 MLC1Q15049 377 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 IDO2Q6ZQW0 420 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ETFBKMTQ8IXQ9 262 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 FRMD1Q8N878 549 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ELSPBP1Q96BH3 223 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 MRPL38Q96DV4 380 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 SLC41A2Q96JW4 573 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CLCC1Q96S66 551 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ISG20L2Q9H9L3 353 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZMAT3Q9HA38 289 aaKnown RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 GPR55Q9Y2T6 319 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 TRIOBPQ9H2D6 2365 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 COL11A2P13942 1736 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 A0A087WV62 115 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 TMEM82A0PJX8 343 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 OR2W5A6NFC9 320 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SUSD5O60279 629 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 LCATP04180 440 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 DLSTP36957 453 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CDK5Q00535 292 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SORDQ00796 357 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CDK5R1Q15078 307 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 CD276Q5ZPR3 534 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF546Q86UE3 836 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 GPR137CQ8N3F9 429 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 C16orf52Q8NHV5 167 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF707Q96C28 371 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 FOXRED1Q96CU9 486 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF578Q96N58 590 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 CDC6Q99741 560 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ULBP3Q9BZM4 244 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 SELENOIQ9C0D9 397 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZNF436Q9C0F3 470 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 VSX1Q9NZR4 365 aaPredicted RBP6.61□□□□□ -1.35
VCAN-202ENST00000342785 TRAPPC4Q9Y296 219 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 MMACHCQ9Y4U1 282 aa6.61□□□□□ -1.35
VCAN-202ENST00000342785 ZFAND5O76080 213 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 HLA-AP01891 365 aaKnown RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 CRYBB2P43320 205 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 OR10A3P58181 314 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SHHQ15465 462 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 TCTN1Q2MV58 587 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SLC16A9Q7RTY1 509 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 OR52I2Q8NH67 350 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 FAM3DQ96BQ1 224 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SLC6A18Q96N87 628 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SLC5A7Q9GZV3 580 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 FBXL2Q9UKC9 423 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 RHBDD3Q9Y3P4 386 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SPTBN2O15020 2390 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 A8MVM7 634 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ZNF705EA8MWA4 302 aaPredicted RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 SERPINA5P05154 406 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 PAPD4Q6PIY7 484 aaKnown RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 KIRREL2Q6UWL6 708 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 PXKQ7Z7A4 578 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 MARCH3Q86UD3 253 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 PM20D2Q8IYS1 436 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 MFSD8Q8NHS3 518 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ORAI1Q96D31 301 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 PBX4Q9BYU1 374 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 MCCC2Q9HCC0 563 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SIRT3Q9NTG7 399 aaPredicted RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 MMP17Q9ULZ9 603 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 A0A0B4J203 849 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 SULT1B1O43704 296 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 DOK2O60496 412 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 HTR3BO95264 441 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ADH6P28332 368 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 MELKQ14680 651 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 TMEM176BQ3YBM2 270 aaPredicted RBP6.6□□□□□ -1.35
VCAN-202ENST00000342785 TMEM201Q5SNT2 666 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 LCN10Q6JVE6 187 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 LINC00346Q8IVM7 164 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 CA13Q8N1Q1 262 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 UCN3Q969E3 161 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 DDOQ99489 341 aa6.6□□□□□ -1.35
VCAN-202ENST00000342785 ZNF831Q5JPB2 1677 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms