RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CDC20BQ86Y33 519 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 CA13Q8N1Q1 262 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 SSC4DQ8WTU2 575 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 EDARADDQ8WWZ3 215 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 C12orf66Q96MD2 445 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 SLC17A9Q9BYT1 436 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 PLA2G2FQ9BZM2 168 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 TTYH1Q9H313 450 aaPredicted RBP4.95□□□□□ -1.62
VPS50-202ENST00000305866 HCN3Q9P1Z3 774 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 ZNF346Q9UL40 294 aaKnown RBP4.95□□□□□ -1.62
VPS50-202ENST00000305866 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
VPS50-202ENST00000305866 ZNF175Q9Y473 711 aa4.95□□□□□ -1.62
VPS50-202ENST00000305866 EFCAB7A8K855 629 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 CEACAM18A8MTB9 384 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 MCIDASD6RGH6 385 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 SULT2B1O00204 365 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 ETV2O00321 342 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 DCTN6O00399 190 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 ZNF217O75362 1048 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RCBTB2O95199 551 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 LDOC1O95751 146 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 HIST1H1CP16403 213 aaKnown RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 S100A11P31949 105 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 SSR2P43308 183 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 HOXA1P49639 335 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 EMDP50402 254 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 FUT7Q11130 342 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 CBFBQ13951 182 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 TMEM196Q5HYL7 178 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 EMC4Q5J8M3 183 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 TJAP1Q5JTD0 557 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 METTL11BQ5VVY1 283 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 CORO6Q6QEF8 472 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 STAC2Q6ZMT1 411 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RTN4RL2Q86UN3 420 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 TOMM5Q8N4H5 51 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 CLRN3Q8NCR9 226 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR4K14Q8NGD5 310 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 GPX8Q8TED1 209 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 SUSD6Q92537 303 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 VSTM2LQ96N03 204 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR2M4Q96R27 311 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 GAS2L1Q99501 681 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 SLC38A3Q99624 504 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 PDCD1LG2Q9BQ51 273 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 EQTNQ9NQ60 294 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 IFT46Q9NQC8 304 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 STEAP1Q9UHE8 339 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 PRELID3BQ9Y3B1 194 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 MAB21L2Q9Y586 359 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 NAP1L6A6NFF2 107 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 GLOD5A6NK44 160 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR4C45A6NMZ5 311 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 FOXI3A8MTJ6 420 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 D6RAR5 112 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 LRRN3E7EW58 273 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 GPRIN2O60269 458 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 STX11O75558 287 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 ACTL6AO96019 429 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR2T7P0C7T2 308 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 PBLDP30039 288 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 MAT2AP31153 395 aaKnown RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 MAS1LP35410 378 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 DIO1P49895 249 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 EFNA3P52797 238 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 PNLIPRP2P54317 469 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RAB38P57729 211 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 TAS2R20P59543 309 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RAP2BP61225 183 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 SIRPAP78324 504 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 KLHL26Q53HC5 615 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 TEX30Q5JUR7 227 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 DCST2Q5T1A1 773 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 FCRLBQ6BAA4 426 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 APOOLQ6UXV4 268 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RANBP3LQ86VV4 465 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 KCNRGQ8N5I3 272 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR4C16Q8NGL9 310 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR2T27Q8NH04 317 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 OR10AC1Q8NH08 325 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RPLP0P6Q8NHW5 317 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 STOML3Q8TAV4 291 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 BMFQ96LC9 184 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 FERD3LQ96RJ6 166 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 LRRN3Q9H3W5 708 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 RERGLQ9H628 205 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 NOX4Q9NPH5 578 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 TRIM36Q9NQ86 728 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 SLC2A4RGQ9NR83 387 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 NCDNQ9UBB6 729 aa4.94□□□□□ -1.62
VPS50-202ENST00000305866 ZNF107Q9UII5 783 aaPredicted RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 MRPS2Q9Y399 296 aaKnown RBP4.94□□□□□ -1.62
VPS50-202ENST00000305866 SYNDIG1LA6NDD5 238 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 RFPL4AA6NLU0 287 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 RFPL4AL1F8VTS6 287 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 SIGLEC6O43699 453 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 CTSVO60911 334 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 CTAG2O75638 210 aa4.93□□□□□ -1.62
VPS50-202ENST00000305866 GPR75O95800 540 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms