RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 HPP00738 406 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 LPLP06858 475 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 IFI6P09912 130 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 OR2T7P0C7T2 308 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 PRKACAP17612 351 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 MPIP34949 423 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 VEGFCP49767 419 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 B2MP61769 119 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 RPS11P62280 158 aaKnown RBP eCLIP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 ZNF169Q14929 603 aaPredicted RBP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 ARHGAP11BQ3KRB8 267 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 EXOSC6Q5RKV6 272 aaKnown RBP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 TMPRSS12Q86WS5 348 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 PDZD9Q8IXQ8 264 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 AMER3Q8N944 861 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 CAMKVQ8NCB2 501 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 OR5AR1Q8NGP9 310 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 OR6K3Q8NGY3 331 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 OR2T27Q8NH04 317 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 LGALS14Q8TCE9 139 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 FCAMRQ8WWV6 532 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 CNOT9Q92600 299 aaKnown RBP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 TFGQ92734 400 aaPredicted RBP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 DACT3Q96B18 629 aaPredicted RBP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 CCDC3Q9BQI4 270 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 CACYBPQ9HB71 228 aaKnown RBP9.44□□□□□ -0.9
UPF3B-201ENST00000276201 C14orf105Q9NVL8 296 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 SERTAD3Q9UJW9 196 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 RCE1Q9Y256 329 aa9.44□□□□□ -0.9
UPF3B-201ENST00000276201 RIIAD1A6NNX1 92 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 J3QLW9 94 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ACOT7O00154 380 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ARPC1BO15143 372 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 HRGP04196 525 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 RPA2P15927 270 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 GLB1P16278 677 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ZNF19P17023 458 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 DRD5P21918 477 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 HIST1H1TP22492 207 aaPredicted RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 RAD52P43351 418 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 GDI2P50395 445 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 CDCP2Q5VXM1 449 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SHEQ5VZ18 495 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ZNF836Q6ZNA1 936 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SLC36A1Q7Z2H8 476 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SZRD1Q7Z422 152 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ARL14Q8N4G2 192 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 MEIOBQ8N635 442 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 DTX3Q8N9I9 347 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 LMNTD1Q8N9Z9 388 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 CLRN3Q8NCR9 226 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 DNAAF1Q8NEP3 725 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 OR1S1Q8NH92 325 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SLC25A38Q96DW6 304 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 CXorf58Q96LI9 332 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ZNF416Q9BWM5 594 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 HCAR1Q9BXC0 346 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 AUNIPQ9H7T9 357 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 PRDM7Q9NQW5 492 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 PCDHB16Q9NRJ7 776 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 LRIT1Q9P2V4 623 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SLC7A7Q9UM01 511 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SIGLEC7Q9Y286 467 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 MSRB2Q9Y3D2 182 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 TRBV23OR9-2A0A075B6M9 112 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 A0A1W2PR48 441 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 DNASE2O00115 360 aaPredicted RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 FRS3O43559 492 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 OR1F1O43749 312 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 NUDT21O43809 227 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 PRG2P13727 222 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ZNF3P17036 446 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ATP5A1P25705 553 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 PTH2RP49190 550 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 OR12D2P58182 307 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 MAT1AQ00266 395 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ZSWIM7Q19AV6 140 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 CFAP77Q6ZQR2 320 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 RAB42Q8N4Z0 105 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 OR5J2Q8NH18 312 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SLC37A2Q8TED4 501 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 PCNPQ8WW12 178 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 TMEM239Q8WW34 195 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 RIT1Q92963 219 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 SLC35A4Q96G79 324 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ART5Q96L15 291 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 QRSL1Q9H0R6 528 aaKnown RBP9.43□□□□□ -0.9
UPF3B-201ENST00000276201 OPN4Q9UHM6 478 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 FOXJ3Q9UPW0 622 aa9.43□□□□□ -0.9
UPF3B-201ENST00000276201 ACACBO00763 2458 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 NTN3O00634 580 aaPredicted RBP9.42□□□□□ -0.9
UPF3B-201ENST00000276201 MT-CO3P00414 261 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 IFNGP01579 166 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 MELTFP08582 738 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 MAKP20794 623 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 CFPP27918 469 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 NDUFS1P28331 727 aa9.42□□□□□ -0.9
UPF3B-201ENST00000276201 PRKAG1P54619 331 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms