RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 EID2Q8N6I1 236 aa17.03■□□□□ 0.32
SSC4D-201ENST00000275560 GAL3ST3Q96A11 431 aa17.03■□□□□ 0.32
SSC4D-201ENST00000275560 TMEM185BQ9H7F4 350 aa17.03■□□□□ 0.32
SSC4D-201ENST00000275560 ENTPD2Q9Y5L3 495 aa17.03■□□□□ 0.32
SSC4D-201ENST00000275560 KNL1Q8NG31 2342 aa17.03■□□□□ 0.32
SSC4D-201ENST00000275560 CHD9Q3L8U1 2897 aa17.03■□□□□ 0.32
SSC4D-201ENST00000275560 TRAV18A0A075B6X5 111 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 TVP23AA6NH52 213 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 H7C417 338 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 KCNAB3O43448 404 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 PRAMEF2O60811 474 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 CTSVO60911 334 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 GPANK1O95872 356 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 ANXA2P07355 339 aaKnown RBP17.02■□□□□ 0.32
SSC4D-201ENST00000275560 ACRP10323 421 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 GGTLC2Q14390 218 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 PDSS1Q5T2R2 415 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 LIPNQ5VXI9 398 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 NDUFAF7Q7L592 441 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 LRRTM1Q86UE6 522 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 POFUT1Q9H488 388 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 MTFP1Q9UDX5 166 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 DAPP1Q9UN19 280 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 PLCL2Q9UPR0 1127 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 BRINP1O60477 761 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 LUMP51884 338 aaPredicted RBP17.02■□□□□ 0.32
SSC4D-201ENST00000275560 FBXO42Q6P3S6 717 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 LEG1Q6P5S2 330 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 ZNF546Q86UE3 836 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 OR6K3Q8NGY3 331 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 TEX101Q9BY14 249 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 NKX6-2Q9C056 277 aaPredicted RBP17.02■□□□□ 0.32
SSC4D-201ENST00000275560 PRELID3BQ9Y3B1 194 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 ZNF175Q9Y473 711 aa17.02■□□□□ 0.32
SSC4D-201ENST00000275560 GPR31O00270 319 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 CCSO14618 274 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 CALCBP10092 127 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 EPCAMP16422 314 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 CAPZA2P47755 286 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 HTRA4P83105 476 aaPredicted RBP17.02■□□□□ 0.31
SSC4D-201ENST00000275560 ETFBKMTQ8IXQ9 262 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 SLC35F3Q8IY50 421 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 OR5AK2Q8NH90 309 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 WFIKKN2Q8TEU8 576 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 SUSD6Q92537 303 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 HHIPL1Q96JK4 782 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 DEC1Q9P2X7 70 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 MRM2Q9UI43 246 aaKnown RBP17.02■□□□□ 0.31
SSC4D-201ENST00000275560 OR10H1Q9Y4A9 318 aa17.02■□□□□ 0.31
SSC4D-201ENST00000275560 PRKNO60260 465 aaPredicted RBP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 WDPCPO95876 746 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 IGKV1D-16P01601 117 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 CDKN2AP42771 156 aaKnown RBP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 GMFBP60983 142 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 ILF3Q12906 894 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 Q499Y3 187 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 LY6G6FQ5SQ64 297 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 EIF4E3Q8N5X7 224 aaKnown RBP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 ZNF426Q9BUY5 554 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 ALG12Q9BV10 488 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 PTDSS2Q9BVG9 487 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 SLC6A15Q9H2J7 730 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 DNAJB12Q9NXW2 375 aaKnown RBP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 M0QYG6 137 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 DCTN6O00399 190 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 CEACAM5P06731 702 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 PGDP52209 483 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 SLC6A19Q695T7 634 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 TMEM185AQ8NFB2 350 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 LCN9Q8WX39 176 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 SEC22AQ96IW7 307 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 BARX1Q9HBU1 254 aaPredicted RBP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 SRA1Q9HD15 236 aaKnown RBP17.01■□□□□ 0.31
SSC4D-201ENST00000275560 APMAPQ9HDC9 416 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 DENND4AQ7Z401 1863 aa17.01■□□□□ 0.31
SSC4D-201ENST00000275560 BLOC1S5-TXNDC5H3BN57 136 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 ZNF254O75437 659 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 LINC01590Q5TEZ4 76 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 NKAIN2Q5VXU1 208 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 USP53Q70EK8 1073 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 CDRT4Q8N9R6 151 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 ZNF768Q9H5H4 540 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 MYEF2Q9P2K5 600 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 DPP7Q9UHL4 492 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 IKZF2Q9UKS7 526 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 XRCC3O43542 346 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 UPK3AO75631 287 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 AQP8O94778 261 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 SLC35G6P0C7Q6 338 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 TSFMP43897 325 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 MRPS10P82664 201 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 MCATQ8IVS2 390 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 OR6N1Q8NGY5 312 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 TMEM106AQ96A25 262 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 ADAD1Q96M93 576 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 SLITRK2Q9H156 845 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 ZMAT3Q9HA38 289 aaKnown RBP17■□□□□ 0.31
SSC4D-201ENST00000275560 DUSP22Q9NRW4 184 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 RXFP3Q9NSD7 469 aa17■□□□□ 0.31
SSC4D-201ENST00000275560 SLC27A6Q9Y2P4 619 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms