RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 R4GN57 208 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 V9GYH0 126 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 PRR32B1ATL7 298 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 LOC110117498-PIK3R3F6TDL0 507 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 SNX4O95219 450 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 IL11P20809 199 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ACVR1BP36896 505 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 FOLR3P41439 243 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 RPL27P61353 136 aaKnown RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 CDK5R1Q15078 307 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 FAM83FQ8NEG4 500 aaPredicted RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 ABHD4Q8TB40 342 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 THAP4Q8WY91 577 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 AP3S1Q92572 193 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 GHSRQ92847 366 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ARL5BQ96KC2 179 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 SNX18Q96RF0 628 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 TXNIPQ9H3M7 391 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 CPNE5Q9HCH3 593 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ABCB9Q9NP78 766 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ACOXLQ9NUZ1 547 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 TBCCD1Q9NVR7 557 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 GPR179Q6PRD1 2367 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 ISPDA4D126 451 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 PMS2P1A4D2B8 440 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 ARHGEF9O43307 516 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 EFNA2O43921 213 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 CBFA2T3O75081 653 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 PLGP00747 810 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-201ENST00000269318 AHCYP23526 432 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 GTF2E2P29084 291 aaKnown RBP14.99□□□□□ -0.01
CCDC40-201ENST00000269318 MTNR1BP49286 362 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 GBX2P52951 348 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-201ENST00000269318 SIRPAP78324 504 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 INPP5JQ15735 1006 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-201ENST00000269318 TRIM16LQ309B1 348 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 STEAP3Q658P3 488 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 PLEKHG7Q6ZR37 379 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 PXKQ7Z7A4 578 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 PM20D2Q8IYS1 436 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 MFSD8Q8NHS3 518 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 POC1BQ8TC44 478 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 RELTQ969Z4 430 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 SMIM19Q96E16 107 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 MRGPRX4Q96LA9 322 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 RNF32Q9H0A6 362 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 GNG8Q9UK08 70 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 TRAPPC4Q9Y296 219 aa14.99□□□□□ -0.01
CCDC40-201ENST00000269318 SHISA8B8ZZ34 492 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 NCR1O76036 304 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 CD1AP06126 327 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF41P51814 821 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MAP2K6P52564 334 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 INSM1Q01101 510 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 CCDC58Q4VC31 144 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 RPL22L1Q6P5R6 122 aaKnown RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 NAXDQ8IW45 347 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MS4A15Q8N5U1 240 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MINDY2Q8NBR6 621 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 OR2M3Q8NG83 312 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 RPS4Y2Q8TD47 263 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 RNF166Q96A37 237 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MRPL48Q96GC5 212 aaKnown RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 FRMD6Q96NE9 622 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 STRADBQ9C0K7 418 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 KLHDC2Q9Y2U9 406 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 PRSS37A4D1T9 235 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 XKRYO14609 159 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 OR6A2O95222 327 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 PSMD7P51665 324 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 ZP4Q12836 540 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 SNTA1Q13424 505 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MFSD13AQ14CX5 517 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 SF3A2Q15428 464 aaKnown RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 TMEM81Q6P7N7 255 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 NDUFAF7Q7L592 441 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 RAB11FIP2Q7L804 512 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 TIPARPQ7Z3E1 657 aaKnown RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 NR2C2APQ86WQ0 139 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 CDC20BQ86Y33 519 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 FADS6Q8N9I5 356 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 SCAIQ8N9R8 606 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 WDSUB1Q8N9V3 476 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 ABTB1Q969K4 478 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 DDIT4LQ96D03 193 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 ATF6BQ99941 703 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 ZPBPQ9BS86 351 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 POTEKPQ9BYX7 375 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MARCH7Q9H992 704 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 VSX1Q9NZR4 365 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-201ENST00000269318 FBXL2Q9UKC9 423 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 PADI1Q9ULC6 663 aa14.98□□□□□ -0.01
CCDC40-201ENST00000269318 MS4A18H0YCH9 400 aa14.97□□□□□ -0.01
CCDC40-201ENST00000269318 TP53I11O14683 189 aa14.97□□□□□ -0.01
CCDC40-201ENST00000269318 FZD7O75084 574 aa14.97□□□□□ -0.01
CCDC40-201ENST00000269318 DLGAP3O95886 979 aa14.97□□□□□ -0.01
CCDC40-201ENST00000269318 IMPDH2P12268 514 aa14.97□□□□□ -0.01
CCDC40-201ENST00000269318 SHC1P29353 583 aa14.97□□□□□ -0.01
CCDC40-201ENST00000269318 GDI2P50395 445 aaKnown RBP14.97□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF79Q15937 498 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms