RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PNMTP11086 282 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 ERP29P30040 261 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 PSMB10P40306 273 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 ADH7P40394 386 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 DCAF7P61962 342 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 GALEQ14376 348 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 INPP5JQ15735 1006 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 ZNF79Q15937 498 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 YOD1Q5VVQ6 348 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 OVCH1Q7RTY7 1134 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 KDM8Q8N371 416 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 FAM181AQ8N9Y4 354 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 NFAM1Q8NET5 270 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 OR52N1Q8NH53 320 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 NAT6Q93015 286 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 SPSB2Q99619 263 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 CCDC32Q9BV29 185 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 C11orf54Q9H0W9 315 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 ABCB9Q9NP78 766 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 MED11Q9P086 117 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 COPS3Q9UNS2 423 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 PCDHGB2Q9Y5G2 931 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 ALG1L2C9J202 215 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 DCTN6O00399 190 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ANKRD34CP0C6C1 535 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 AHCYP23526 432 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 GZMKP49863 264 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ZMYND11Q15326 602 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ZSWIM7Q19AV6 140 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 COL28A1Q2UY09 1125 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 LAMTOR1Q6IAA8 161 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 DPY19L2P2Q6ZN68 376 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 OR8H3Q8N146 312 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 GALNT11Q8NCW6 608 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 OR5W2Q8NH69 310 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 EVA1AQ9H8M9 152 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ENAMQ9NRM1 1142 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 PLEKHB1Q9UF11 243 aaPredicted RBP12.31□□□□□ -0.44
VMP1-201ENST00000262291 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TTC28Q96AY4 2481 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 A0A087WV48 116 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 A0A1W2PRG6 482 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TVP23AA6NH52 213 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 D6RAR5 112 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 RNF13O43567 381 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 FADS1O60427 444 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 GP1BBP13224 206 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 SPI1P17947 270 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 IL11P20809 199 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ZNF385CQ66K41 422 aaPredicted RBP12.31□□□□□ -0.44
VMP1-201ENST00000262291 FAM122CQ6P4D5 195 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ASB15Q8WXK1 588 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 IER2Q9BTL4 223 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TGIF2Q9GZN2 237 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 COMMD3Q9UBI1 195 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 BAIAP2Q9UQB8 552 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 SDK2Q58EX2 2172 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TO15178 435 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 PNLIPRP2P54317 469 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
VMP1-201ENST00000262291 RUNX1T1Q06455 604 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 TIGD4Q8IY51 512 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ARIH2OSQ8N7S6 290 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 NEIL3Q8TAT5 605 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 SLC25A46Q96AG3 418 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 FRMD6Q96NE9 622 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ADAM19Q9H013 955 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 ARRDC1-AS1Q9H2J1 176 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 EXOSC3Q9NQT5 275 aaKnown RBP12.31□□□□□ -0.44
VMP1-201ENST00000262291 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 V9GYH0 126 aa12.31□□□□□ -0.44
VMP1-201ENST00000262291 IGLV3-12A0A075B6K2 115 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 TMEM72A0PK05 275 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 H3BSH0 61 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 SUSD5O60279 629 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 OR2J2O76002 312 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 NRG3P56975 720 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 RAB25P57735 213 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 PON3Q15166 354 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 ARSKQ6UWY0 536 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 CPEB2Q7Z5Q1 589 aaKnown RBP12.3□□□□□ -0.44
VMP1-201ENST00000262291 JAZF1Q86VZ6 243 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 MR1Q95460 341 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 GNG8Q9UK08 70 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 ING1Q9UK53 422 aaPredicted RBP12.3□□□□□ -0.44
VMP1-201ENST00000262291 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 SLC25A12O75746 678 aa12.3□□□□□ -0.44
VMP1-201ENST00000262291 MT-ND5P03915 603 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms