RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 SLC52A3Q9NQ40 469 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 MKS1Q9NXB0 559 aa17.28■□□□□ 0.36
TARDBP-228ENST00000629725 ZNF99A8MXY4 864 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-228ENST00000629725 SEC14L2O76054 403 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 BCL10O95999 233 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 NR2F1P10589 423 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 PNMTP11086 282 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 GTF2E2P29084 291 aaKnown RBP17.27■□□□□ 0.36
TARDBP-228ENST00000629725 ANXA11P50995 505 aaKnown RBP17.27■□□□□ 0.36
TARDBP-228ENST00000629725 ACSM5Q6NUN0 579 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 MFSD8Q8NHS3 518 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 TESCQ96BS2 214 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 SLC25A36Q96CQ1 311 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 MS4A3Q96HJ5 214 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 PPP1R36Q96LQ0 422 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 ESM1Q9NQ30 184 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 B3GNT2Q9NY97 397 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 SLC17A7Q9P2U7 560 aa17.27■□□□□ 0.36
TARDBP-228ENST00000629725 A0A0G2JMP0 313 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 A0A0X1KG70 313 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 FTCDNL1E5RQL4 147 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 AHSA1O95433 338 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 HLA-HP01893 362 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 CD79AP11912 226 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF35P13682 527 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 TXNL4AP83876 142 aaKnown RBP17.26■□□□□ 0.35
TARDBP-228ENST00000629725 FOXL1Q12952 345 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 MAD2L1BPQ15013 274 aaPredicted RBP17.26■□□□□ 0.35
TARDBP-228ENST00000629725 GSG1Q2KHT4 349 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 TRMT5Q32P41 509 aaKnown RBP17.26■□□□□ 0.35
TARDBP-228ENST00000629725 SPANXN4Q5MJ08 99 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 GKAP1Q5VSY0 366 aaPredicted RBP17.26■□□□□ 0.35
TARDBP-228ENST00000629725 C1QL2Q7Z5L3 287 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 LRP11Q86VZ4 500 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 BPIFB2Q8N4F0 458 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 TRIML2Q8N7C3 387 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 ZDHHC22Q8N966 263 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 PIK3C3Q8NEB9 887 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 OR4M2Q8NGB6 313 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 STK35Q8TDR2 534 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 OXGR1Q96P68 337 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 ZIM3Q96PE6 472 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 TMPRSS13Q9BYE2 586 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 AKTIPQ9H8T0 292 aa17.26■□□□□ 0.35
TARDBP-228ENST00000629725 MYEF2Q9P2K5 600 aaKnown RBP17.26■□□□□ 0.35
TARDBP-228ENST00000629725 RP2O75695 350 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 NCR1O76036 304 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 MPZL1O95297 269 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 NAT2P11245 290 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF14P17017 642 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-228ENST00000629725 ADRA2CP18825 462 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 NCF2P19878 526 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-228ENST00000629725 RPS5P46782 204 aaKnown RBP17.25■□□□□ 0.35
TARDBP-228ENST00000629725 RPS23P62266 143 aaKnown RBP17.25■□□□□ 0.35
TARDBP-228ENST00000629725 GALK2Q01415 458 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 PIGFQ07326 219 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 C1DQ13901 141 aaKnown RBP17.25■□□□□ 0.35
TARDBP-228ENST00000629725 DPY19L1Q2PZI1 675 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 LIN52Q52LA3 116 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 ATG16L1Q676U5 607 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF836Q6ZNA1 936 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 VRK2Q86Y07 508 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 NANPQ8TBE9 248 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF385DQ9H6B1 395 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF665Q9H7R5 613 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 DDX28Q9NUL7 540 aaKnown RBP17.25■□□□□ 0.35
TARDBP-228ENST00000629725 B3GAT1Q9P2W7 334 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 SEC14L4Q9UDX3 406 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 FZR1Q9UM11 496 aa17.25■□□□□ 0.35
TARDBP-228ENST00000629725 CCDC154A6NI56 674 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 UBA52P62987 128 aaKnown RBP17.24■□□□□ 0.35
TARDBP-228ENST00000629725 PDCD2Q16342 344 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-228ENST00000629725 OR52P1PQ8NH57 321 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 CCDC115Q96NT0 180 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 OR2M2Q96R28 347 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 PTDSS2Q9BVG9 487 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 DUSP13Q9UII6 198 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 BTNL2Q9UIR0 455 aa17.24■□□□□ 0.35
TARDBP-228ENST00000629725 A0A1W2PPW3 197 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 J3QLI3 93 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 M0R3G1 203 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 PLPP2O43688 288 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 AKAP8O43823 692 aaKnown RBP17.23■□□□□ 0.35
TARDBP-228ENST00000629725 PRG2P13727 222 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 S100A3P33764 101 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 CLNS1AP54105 237 aaKnown RBP17.23■□□□□ 0.35
TARDBP-228ENST00000629725 CHI3L2Q15782 390 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 FXNQ16595 210 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 COX20Q5RI15 118 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 EIF1ADQ8N9N8 165 aaKnown RBP17.23■□□□□ 0.35
TARDBP-228ENST00000629725 PNPT1Q8TCS8 783 aaKnown RBP17.23■□□□□ 0.35
TARDBP-228ENST00000629725 MGARPQ8TDB4 240 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 TCP10LQ8TDR4 215 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 RAB39BQ96DA2 213 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF75AQ96N20 296 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 PANX1Q96RD7 426 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 NTN4Q9HB63 628 aa17.23■□□□□ 0.35
TARDBP-228ENST00000629725 ZNF346Q9UL40 294 aaKnown RBP17.23■□□□□ 0.35
TARDBP-228ENST00000629725 VWFP04275 2813 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms