RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NAA11Q9BSU3 229 aaPredicted RBP15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 KATNB1Q9BVA0 655 aa15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 PRRG3Q9BZD7 231 aa15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 PLSCR2Q9NRY7 297 aa15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 BAIAP2Q9UQB8 552 aa15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 ADAM18Q9Y3Q7 739 aa15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 IER3IP1Q9Y5U9 82 aa15.95■□□□□ 0.14
PTCHD3-202ENST00000622555 IGHV3-15A0A0B4J1V0 119 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 AQP7P3A6NL99 342 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF814B7Z6K7 855 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 AQP7O14520 342 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 HMGN1P05114 100 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CD14P08571 375 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 SFTPCP11686 197 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 KLK2P20151 261 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 PAX7P23759 505 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 GRK5P34947 590 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 MLLT10P55197 1068 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 HSF1Q00613 529 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 ZP4Q12836 540 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 TOP3AQ13472 1001 aaPredicted RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 SNAPC1Q16533 368 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 SLC35F1Q5T1Q4 408 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 TMEM225Q6GV28 225 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 THAP5Q7Z6K1 395 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CISD2Q8N5K1 135 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF845Q96IR2 970 aaPredicted RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CNTNAP3BQ96NU0 1288 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 UCN2Q96RP3 112 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 POLDIP3Q9BY77 421 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CNTNAP3Q9BZ76 1288 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 YIPF3Q9GZM5 350 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 RBM38Q9H0Z9 239 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 NRIP3Q9NQ35 241 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CAMK2AQ9UQM7 478 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 PLGP00747 810 aaPredicted RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 ENPP1P22413 925 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 P2RY4P51582 365 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 AGFG1P52594 562 aaKnown RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 H3F3AP84243 136 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 KLRB1Q12918 225 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CCDC103Q8IW40 242 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 UBE2FQ969M7 185 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 CPNE4Q96A23 557 aaPredicted RBP15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 WDYHV1Q96HA8 205 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 PLEKHA8Q96JA3 519 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 RASSF1Q9NS23 344 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 RNF6Q9Y252 685 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 HSPE1-MOB4S4R3N1 261 aa15.94■□□□□ 0.14
PTCHD3-202ENST00000622555 PRRC2CQ9Y520 2896 aaKnown RBP15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 BOD1L1Q8NFC6 3051 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 GTF3C1Q12789 2109 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 A0A1B0GTH9 108 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 A0A1W2PNV4 684 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 ERVH48-1M5A8F1 160 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 RAMP1O60894 148 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 CPN1P15169 458 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 ATP6V1B1P15313 513 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 PCYT1AP49585 367 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF239Q16600 458 aaKnown RBP15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 CNPY1Q3B7I2 92 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 ARHGAP11AQ6P4F7 1023 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 PTCHD4Q6ZW05 846 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 CHMP1BQ7LBR1 199 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 GPAT4Q86UL3 456 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 ENTHD1Q8IYW4 607 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 ANKK1Q8NFD2 765 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 SARAFQ96BY9 339 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 DGCR14Q96DF8 476 aaKnown RBP15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 GPR137Q96N19 417 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 IL4I1Q96RQ9 567 aa15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 PAQR5Q9NXK6 330 aaPredicted RBP15.93■□□□□ 0.14
PTCHD3-202ENST00000622555 A0A087WXM4 84 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 A0A1W2PRG6 482 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 NPIPA2E9PIF3 369 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 NPIPA3F8WFD2 350 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 ARPC3O15145 178 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 SMAD9O15198 467 aaKnown RBP15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 SURF4O15260 269 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 HLA-DOBP13765 273 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 ISL1P61371 349 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 POU3F1Q03052 451 aaPredicted RBP15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 CD47Q08722 323 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 LY6DQ14210 128 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 PXKQ7Z7A4 578 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 UEVLDQ8IX04 471 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 GHDCQ8N2G8 530 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF786Q8N393 782 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 TCEANCQ8N8B7 351 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 LSM14AQ8ND56 463 aaKnown RBP15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 ROBO4Q8WZ75 1007 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 OXGR1Q96P68 337 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 TSPAN32Q96QS1 320 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 ZNF226Q9NYT6 803 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 KLHL13Q9P2N7 655 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 B3GAT1Q9P2W7 334 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 GRHPRQ9UBQ7 328 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 AASSQ9UDR5 926 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 RASD1Q9Y272 281 aa15.92■□□□□ 0.14
PTCHD3-202ENST00000622555 ALPK2Q86TB3 2170 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms