RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	PLAT	P00750	562 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4L2	P0CJ85	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4L3	P0CJ86	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4L4	P0CJ87	422 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4L5	P0CJ88	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4L6	P0CJ89	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4L7	P0CJ90	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	SPI1	P17947	270 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	SORD	Q00796	357 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	ID2	Q02363	134 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	RUNX2	Q13950	521 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	ALG10B	Q5I7T1	473 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	ZNF684	Q5T5D7	378 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	ZAR1	Q86SH2	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	PAQR7	Q86WK9	346 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	OR5T2	Q8NGG2	359 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	LRRC46	Q96FV0	321 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	NMNAT3	Q96T66	252 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	TIMM29	Q9BSF4	260 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	RSPH9	Q9H1X1	276 aa	Predicted RBP	15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DUX4	Q9UBX2	424 aa		15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	SNRNP200	O75643	2136 aa	Known RBP	15.18	■□□□□ 0.02
CAPN12-211	ENST00000601685	DNAH14	Q0VDD8	3507 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	TMEM272	A0A1B0GTI8	110 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	XRCC3	O43542	346 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	ADAM11	O75078	769 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	CSF1	P09603	554 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	HTRA3	P83110	453 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	LTB	Q06643	244 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685		Q499Y3	187 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	LRRTM1	Q86UE6	522 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	OR6K6	Q8NGW6	343 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	NT5C	Q8TCD5	201 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	TNFAIP8L1	Q8WVP5	186 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	ASB13	Q8WXK3	278 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	PMM1	Q92871	262 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	TRIM43	Q96BQ3	446 aa	Predicted RBP	15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	SERINC2	Q96SA4	455 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	TRPV4	Q9HBA0	871 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	TAS2R8	Q9NYW2	309 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	SCN3A	Q9NY46	2000 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	FAM74A7	A6NL05	159 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	RFPL4A	A6NLU0	287 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	RFPL4AL1	F8VTS6	287 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	CBX7	O95931	251 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	AK1	P00568	194 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	TLX1	P31314	330 aa	Predicted RBP	15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	PLA2G7	Q13093	441 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	FAM74A3	Q4VXF1	159 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	LINC00114	Q6XXX2	140 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	KRT77	Q7Z794	578 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	OR4D10	Q8NGI6	311 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	ZPLD1	Q8TCW7	415 aa		15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	ATOH1	Q92858	354 aa	Predicted RBP	15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	KLF2	Q9Y5W3	355 aa	Predicted RBP	15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685	MUC22	E2RYF6	1773 aa	Predicted RBP	15.17	■□□□□ 0.02
CAPN12-211	ENST00000601685		A0A087WV62	115 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	OR6C68	A6NDL8	312 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	UBB	P0CG47	229 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	UBC	P0CG48	685 aa	Known RBP	15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	GABRA3	P34903	492 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	ACAA2	P42765	397 aa	Known RBP	15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	RPS15A	P62244	130 aa	Known RBP	15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	RPS27A	P62979	156 aa	Known RBP	15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	UBA52	P62987	128 aa	Known RBP	15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SLC6A19	Q695T7	634 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	ZCCHC12	Q6PEW1	402 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	LRRN1	Q6UXK5	716 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	ZNF784	Q8NCA9	323 aa	Predicted RBP	15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	OR10K1	Q8NGX5	313 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	ZCCHC10	Q8TBK6	192 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	PBX4	Q9BYU1	374 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	NMNAT2	Q9BZQ4	307 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	TRIM2	Q9C040	744 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	TMEM138	Q9NPI0	162 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	TMEM74B	Q9NUR3	256 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	HPF1	Q9NWY4	346 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	RASL12	Q9NYN1	266 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	DAPP1	Q9UN19	280 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	PLCL2	Q9UPR0	1127 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SIGLEC5	O15389	551 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	TIMP1	P01033	207 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	EGF	P01133	1207 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SMIM10L1	P0DMW3	83 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	GRPR	P30550	384 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	MAP3K8	P41279	467 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SIGLEC14	Q08ET2	396 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	GRM7	Q14831	915 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	GAB4	Q2WGN9	574 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	DEFB134	Q4QY38	66 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	PABPC1L2A	Q5JQF8	200 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	C11orf88	Q6PI97	169 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	MAMSTR	Q6ZN01	415 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	TMPRSS12	Q86WS5	348 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SDR16C5	Q8N3Y7	309 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	ST8SIA2	Q92186	375 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SUSD6	Q92537	303 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	SMIM10	Q96HG1	83 aa		15.16	■□□□□ 0.02
CAPN12-211	ENST00000601685	LRRC72	A6NJI9	287 aa		15.15	■□□□□ 0.02
CAPN12-211	ENST00000601685	LDB3	O75112	727 aa		15.15	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms