RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ASB18Q6ZVZ8 466 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 TRILQ7L0X0 811 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 CXXC5Q7LFL8 322 aaKnown RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 PXKQ7Z7A4 578 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 JAZF1Q86VZ6 243 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 MEIOBQ8N635 442 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 OR52E2Q8NGJ4 325 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 TSPAN32Q96QS1 320 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 ARHGAP9Q9BRR9 750 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 MFRPQ9BY79 579 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 PLCXD1Q9NUJ7 323 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 H2AFY2Q9P0M6 372 aaPredicted RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 SCOCQ9UIL1 159 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 PRR23D1E9PI22 279 aaPredicted RBP20.23■□□□□ 0.83
IRF3-228ENST00000601291 IGHMP01871 453 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 PRR23D2P0DMB1 279 aaPredicted RBP20.23■□□□□ 0.83
IRF3-228ENST00000601291 ACVR2AP27037 513 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 DAP3P51398 398 aaKnown RBP20.23■□□□□ 0.83
IRF3-228ENST00000601291 CARD18P57730 90 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 BCL2A1Q16548 175 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 NXNL2Q5VZ03 156 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 TMEM225Q6GV28 225 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 RPUSD3Q6P087 351 aaKnown RBP20.23■□□□□ 0.83
IRF3-228ENST00000601291 ZFHX4Q86UP3 3567 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 OR4K13Q8NH42 304 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 RFKQ969G6 155 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 OTULINQ96BN8 352 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 RASD2Q96D21 266 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 ADGRG7Q96K78 797 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 Q96M85 177 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 ZNF582Q96NG8 517 aaPredicted RBP20.23■□□□□ 0.83
IRF3-228ENST00000601291 TXNIPQ9H3M7 391 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 LIPGQ9Y5X9 500 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 CNTRLQ7Z7A1 2325 aa20.23■□□□□ 0.83
IRF3-228ENST00000601291 NPIPB13A6NJU9 1138 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 EIF4E1BA6NMX2 242 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 KDM4EB2RXH2 506 aaPredicted RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 NPIPB4C9JG80 1138 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 NPIPA5E9PKD4 350 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 PRODHO43272 600 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 ZNF708P17019 499 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 EIF1AXP47813 144 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 NUDT6P53370 316 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 SUCLG1P53597 346 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 RPL27P61353 136 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 POU3F1Q03052 451 aaPredicted RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 KRR1Q13601 381 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 CRMP1Q14194 572 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 ACKR1Q16570 336 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 PLBD1Q6P4A8 553 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 CPOQ8IVL8 374 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 GID4Q8IVV7 300 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 UEVLDQ8IX04 471 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 SLC37A3Q8NCC5 494 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 ZNF540Q8NDQ6 660 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 SDR9C7Q8NEX9 313 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 TSPAN14Q8NG11 270 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 OR10D3Q8NH80 312 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 HINT3Q9NQE9 182 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 ZNF346Q9UL40 294 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 NPIPA1Q9UND3 350 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 RASD1Q9Y272 281 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 RPL36Q9Y3U8 105 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 NOX1Q9Y5S8 564 aa20.22■□□□□ 0.83
IRF3-228ENST00000601291 TNRC6AQ8NDV7 1962 aaKnown RBP20.22■□□□□ 0.83
IRF3-228ENST00000601291 H0YC42 278 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 XKRYO14609 159 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 VAMP5O95183 116 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 IGHG3P01860 377 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 P2RY4P51582 365 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 CLDN18P56856 261 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 RPS3AP61247 264 aaKnown RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 H3F3AP84243 136 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 HSF1Q00613 529 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 ITGADQ13349 1161 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 ZNF362Q5T0B9 420 aaPredicted RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 BCDIN3DQ7Z5W3 292 aaKnown RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 KDM8Q8N371 416 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 C9orf43Q8TAL5 461 aaPredicted RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 IPCEF1Q8WWN9 437 aaPredicted RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 CPNE4Q96A23 557 aaPredicted RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 OXGR1Q96P68 337 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 CCNB1IP1Q9NPC3 277 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 TUBD1Q9UJT1 453 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.21■□□□□ 0.836e-8■□□□□ 9.9
IRF3-228ENST00000601291 TRIM64A6NGJ6 449 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 FAM183AA6NL82 134 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 PTGES3LE9PB15 166 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 CXCL13O43927 109 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 ENPP1P22413 925 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 AGFG1P52594 562 aaKnown RBP20.21■□□□□ 0.83
IRF3-228ENST00000601291 AADACL4Q5VUY2 407 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 FAM205BPQ63HN1 556 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 VASNQ6EMK4 673 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 ADCK1Q86TW2 530 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 GPAT4Q86UL3 456 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 ARIH2OSQ8N7S6 290 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 SRXN1Q9BYN0 137 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 AMBNQ9NP70 447 aa20.21■□□□□ 0.83
IRF3-228ENST00000601291 PAQR5Q9NXK6 330 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms