RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ABHD12BQ7Z5M8 362 aaPredicted RBP12.19□□□□□ -0.46
UPF1-205ENST00000598209 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 RBM15BQ8NDT2 890 aaKnown RBP12.19□□□□□ -0.46
UPF1-205ENST00000598209 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 TMEM239Q8WW34 195 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 PLPPR2Q96GM1 343 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 HS6ST2Q96MM7 605 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ALKBH3Q96Q83 286 aaPredicted RBP12.19□□□□□ -0.46
UPF1-205ENST00000598209 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 CD300AQ9UGN4 299 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ST6GALNAC2Q9UJ37 374 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ZNF229Q9UJW7 825 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 ITGB1BP2Q9UKP3 347 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 DSCAMO60469 2012 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 CSMD1Q96PZ7 3565 aa12.19□□□□□ -0.46
UPF1-205ENST00000598209 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 B2RBV5 119 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 ZNF587BE7ETH6 402 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 C11orf98E9PRG8 122 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 AKAP8O43823 692 aaKnown RBP12.18□□□□□ -0.46
UPF1-205ENST00000598209 SLC43A1O75387 559 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 UPK3AO75631 287 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 OR6A2O95222 327 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 MT-ND1P03886 318 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 HIST1H2ABP04908 130 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 ADORA3P0DMS8 318 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 UMPSP11172 480 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 AHCYP23526 432 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 MSX2P35548 267 aaPredicted RBP12.18□□□□□ -0.46
UPF1-205ENST00000598209 NR1H2P55055 460 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 POU3F1Q03052 451 aaPredicted RBP12.18□□□□□ -0.46
UPF1-205ENST00000598209 TGFBR3Q03167 851 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 FXNQ16595 210 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 OR7E24Q6IFN5 339 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 SEZ6L2Q6UXD5 910 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 PAMR1Q6UXH9 720 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 HIST3H2AQ7L7L0 130 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 SLC46A3Q7Z3Q1 461 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 OFCC1Q8IZS5 231 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 LRRC17Q8N6Y2 441 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 C1orf162Q8NEQ5 155 aaPredicted RBP12.18□□□□□ -0.46
UPF1-205ENST00000598209 OR52N5Q8NH56 324 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 BCAS4Q8TDM0 211 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 HIST1H2ACQ93077 130 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 MUS81Q96NY9 551 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 FNDC11Q9BVV2 318 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 LINC00470Q9BZP3 86 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 GORASP2Q9H8Y8 452 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 DCAF13Q9NV06 445 aaKnown RBP12.18□□□□□ -0.46
UPF1-205ENST00000598209 RHCGQ9UBD6 479 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 MAGEL2Q9UJ55 1249 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 EDARQ9UNE0 448 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 SAMD4AQ9UPU9 718 aaKnown RBP12.18□□□□□ -0.46
UPF1-205ENST00000598209 PLEKHA6Q9Y2H5 1048 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 MED31Q9Y3C7 131 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 CADP27708 2225 aa12.18□□□□□ -0.46
UPF1-205ENST00000598209 MYO9AB2RTY4 2548 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 FFAR1O14842 300 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 PIP5K1CO60331 668 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 SERPINI2O75830 405 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 OR7A10O76100 309 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 IGF2P01344 180 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 ASAH2BP0C7U1 165 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 CDH2P19022 906 aaPredicted RBP12.17□□□□□ -0.46
UPF1-205ENST00000598209 FUT4P22083 530 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 CALB2P22676 271 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 DNASE1P24855 282 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 IST1P53990 364 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 ZP4Q12836 540 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 NHLRC1Q6VVB1 395 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 LINGO2Q7L985 606 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 SSX8Q7RTT4 187 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 NANOGNBQ7Z5D8 188 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 TMEM123Q8N131 208 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 NINJ1Q92982 152 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 SGTBQ96EQ0 304 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 TXNDC15Q96J42 360 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 OR2M2Q96R28 347 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 EMC6Q9BV81 110 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 UBTD1Q9HAC8 227 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 MAN2C1Q9NTJ4 1040 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 C20orf141Q9NUB4 165 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 MED29Q9NX70 200 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 TAS2R5Q9NYW4 299 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 SLC25A15Q9Y619 301 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 ENPP4Q9Y6X5 453 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 ROS1P08922 2347 aa12.17□□□□□ -0.46
UPF1-205ENST00000598209 A0A1W2PR80 420 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 ARPC2O15144 300 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 RNF13O43567 381 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 PRSS23O95084 383 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 PLAUP00749 431 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 RAF1P04049 648 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 T-ENOLP0DO92 83 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 FUT1P19526 365 aa12.16□□□□□ -0.46
UPF1-205ENST00000598209 HOXC12P31275 282 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms