RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 RASSF4Q9H2L5 321 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 TOR3AQ9H497 397 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 FANCFQ9NPI8 374 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 C8orf4Q9NR00 106 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 IL20RAQ9UHF4 553 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 TINAGQ9UJW2 476 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 ING1Q9UK53 422 aaPredicted RBP8.5□□□□□ -1.05
RFFL-210ENST00000582308 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
RFFL-210ENST00000582308 MCTS1Q9ULC4 181 aaKnown RBP8.5□□□□□ -1.05
RFFL-210ENST00000582308 RASD1Q9Y272 281 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 ZNF175Q9Y473 711 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 FAM215AQ9Y5M1 114 aa8.5□□□□□ -1.05
RFFL-210ENST00000582308 FIGNL2A6NMB9 653 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ZNF716A6NP11 495 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 MCIDASD6RGH6 385 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 E9PQ18 207 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 H3BN98 237 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 RNF13O43567 381 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 TRAF3IP2O43734 574 aaPredicted RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 NDUFB2O95178 105 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 VAMP5O95183 116 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CD14P08571 375 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 HOXD4P09016 255 aaPredicted RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 POU1F1P28069 291 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 NTF4P34130 210 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 PTGER4P35408 488 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 GIPRP48546 466 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 SLC16A1P53985 500 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CRISP1P54107 249 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 RAD23AP54725 363 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CTXN1P60606 82 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ESRRGP62508 458 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CDK5Q00535 292 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 TLE1Q04724 770 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 RASGEF1BQ0VAM2 473 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 NPRL3Q12980 569 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 MRPL49Q13405 166 aaKnown RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 POU4F3Q15319 338 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 SF3B4Q15427 424 aaKnown RBP eCLIP8.49□□□□□ -1.05
RFFL-210ENST00000582308 IGFBP7Q16270 282 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ALG10Q5BKT4 473 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CLEC12AQ5QGZ9 265 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 C1orf185Q5T7R7 199 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 TMEM236Q5W0B7 351 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ACSM5Q6NUN0 579 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 RPL13AP3Q6NVV1 102 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CREB3L2Q70SY1 520 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 GPAT4Q86UL3 456 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 WDFY1Q8IWB7 410 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 SLC43A2Q8N370 569 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 IQCF1Q8N6M8 205 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 C9orf106Q8NAJ2 232 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ANKK1Q8NFD2 765 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 OR9K2Q8NGE7 335 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 OR4Q3Q8NH05 313 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 WNT2BQ93097 391 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 TXNDC15Q96J42 360 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 GPX7Q96SL4 187 aaPredicted RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 KATNB1Q9BVA0 655 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 SF3B5Q9BWJ5 86 aaKnown RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 TSSK6Q9BXA6 273 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 TP63Q9H3D4 680 aaPredicted RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 RIBC2Q9H4K1 309 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 RNF122Q9H9V4 155 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 INIPQ9NRY2 104 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 TBC1D23Q9NUY8 699 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 CLEC4AQ9UMR7 237 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ADAM18Q9Y3Q7 739 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 ORC6Q9Y5N6 252 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 NOX1Q9Y5S8 564 aa8.49□□□□□ -1.05
RFFL-210ENST00000582308 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
RFFL-210ENST00000582308 ZNF462Q96JM2 2506 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 IGKV3D-15A0A087WSY6 115 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 MBD3L4A6NDZ8 208 aaPredicted RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 MBD3L3A6NE82 208 aaPredicted RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 MBD3L5A6NJ08 208 aaPredicted RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 ZAR1LA6NP61 321 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 H0YJX3 145 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 BHLHE40O14503 412 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 SERPINI2O75830 405 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 TOXO94900 526 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 PPP1R3DO95685 299 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 PLGP00747 810 aaPredicted RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 GLI4P10075 376 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 IFNGR1P15260 489 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 ZNF43P17038 809 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 SLC6A6P31641 620 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 RPL4P36578 427 aaKnown RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 VHLP40337 213 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 AQP4P55087 323 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 ERVK-25P63136 954 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 C1DQ13901 141 aaKnown RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 GINS1Q14691 196 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 PDK3Q15120 406 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 PTGES3Q15185 160 aaKnown RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 RNPS1Q15287 305 aaKnown RBP8.48□□□□□ -1.05
RFFL-210ENST00000582308 DPY19L2P2Q6ZN68 376 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 FAM122BQ7Z309 247 aa8.48□□□□□ -1.05
RFFL-210ENST00000582308 P4HA3Q7Z4N8 544 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms