RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 CENPHQ9H3R5 247 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 SEC61A2Q9H9S3 476 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 C12orf10Q9HB07 376 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 CACYBPQ9HB71 228 aaKnown RBP9.18□□□□□ -0.94
RFFL-209ENST00000581265 CRLF2Q9HC73 371 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 GPR35Q9HC97 309 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 ANK2Q01484 3957 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 IGHV2OR16-5A0A0B4J2B6 119 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 LRP5LA4QPB2 252 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 hCG_2039718K7EN88 272 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 ERCC1P07992 297 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 IGFBP1P08833 259 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 CELA3BP08861 270 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 NUDT7P0C024 238 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 DAOP14920 347 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 ETS2P15036 469 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 CFPP27918 469 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 HOXC5Q00444 222 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 POU3F1Q03052 451 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 RGNQ15493 299 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 CR1LQ2VPA4 569 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 GTDC1Q4AE62 458 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 FAM69AQ5T7M9 428 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 NXNQ6DKJ4 435 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 H1FNTQ75WM6 255 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 MYPOPQ86VE0 399 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 ZCCHC24Q8N2G6 241 aaKnown RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 GPR137CQ8N3F9 429 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 PIK3C3Q8NEB9 887 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 SGMS2Q8NHU3 365 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 GTF2H4Q92759 462 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 TAAR8Q969N4 342 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 ZNF837Q96EG3 531 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 RSPO3Q9BXY4 272 aaPredicted RBP9.17□□□□□ -0.94
RFFL-209ENST00000581265 A4GALTQ9NPC4 353 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 B3GNT2Q9NY97 397 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 SEC14L4Q9UDX3 406 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 PCDHB14Q9Y5E9 798 aa9.17□□□□□ -0.94
RFFL-209ENST00000581265 TMEM120BA0PK00 339 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ZNF503-AS2A6NEH8 195 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ZNF99A8MXY4 864 aaPredicted RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 M0R082 166 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 CLIC1O00299 241 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 AIM2O14862 343 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 KITP10721 976 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 GTF2E2P29084 291 aaKnown RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 GRPRP30550 384 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 PRKAR1BP31321 381 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 EVX1P49640 407 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 POLR2JP52435 117 aaKnown RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 CHN2P52757 468 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 SLC18A1P54219 525 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 FADDQ13158 208 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 RIN1Q13671 783 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 C1DQ13901 141 aaKnown RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 CEACAM16Q2WEN9 425 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 SLC9B1Q4ZJI4 515 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 C6orf10Q5SRN2 563 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 UGT2A3Q6UWM9 527 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 NHLRC1Q6VVB1 395 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ZNF627Q7L945 461 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 SPATA21Q7Z572 469 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 TMEM123Q8N131 208 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 SVOPLQ8N434 492 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 RFLNBQ8N5W9 214 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ANKRD42Q8N9B4 389 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ADPRHL1Q8NDY3 354 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 BBS10Q8TAM1 723 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ZNF417Q8TAU3 575 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 UBASH3BQ8TF42 649 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 DNAJA4Q8WW22 397 aaPredicted RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 SLC38A4Q969I6 547 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 MAL2Q969L2 176 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ZMYND19Q96E35 227 aaPredicted RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 SLC41A3Q96GZ6 507 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 C1orf159Q96HA4 380 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 LRR1Q96L50 414 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 OR2M2Q96R28 347 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 ZNF587Q96SQ5 575 aaPredicted RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 PAIP1Q9H074 479 aaKnown RBP9.16□□□□□ -0.94
RFFL-209ENST00000581265 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 RPS6KB2Q9UBS0 482 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 USP22Q9UPT9 525 aa9.16□□□□□ -0.94
RFFL-209ENST00000581265 IGKV1D-42A0A075B6H8 117 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 A0A1B0GWA3 101 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 SH3PXD2BA1X283 911 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 MS4A18H0YCH9 400 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 UBDO15205 165 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 TRAF3IP2O43734 574 aaPredicted RBP9.15□□□□□ -0.94
RFFL-209ENST00000581265 AKAP8O43823 692 aaKnown RBP9.15□□□□□ -0.94
RFFL-209ENST00000581265 ADRA2AP08913 450 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 HOXB9P17482 250 aaPredicted RBP9.15□□□□□ -0.94
RFFL-209ENST00000581265 NR4A1P22736 598 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 IL2RGP31785 369 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 DAG1Q14118 895 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 MFSD13AQ14CX5 517 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 ADRM1Q16186 407 aa9.15□□□□□ -0.94
RFFL-209ENST00000581265 MS4A18Q3C1V0 323 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms