RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 OIT3Q8WWZ8 545 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 OR5P2Q8WZ92 322 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 ALKBH3Q96Q83 286 aaPredicted RBP12.63□□□□□ -0.39
IFT20-211ENST00000580991 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 MED29Q9NX70 200 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 TAS2R1Q9NYW7 299 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 ATP6V1HQ9UI12 483 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 TMED5Q9Y3A6 229 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 PPIAL4AQ9Y536 164 aa12.63□□□□□ -0.39
IFT20-211ENST00000580991 TMED7-TICAM2A0A0A6YYA0 188 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 J3QLI3 93 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 SCAMP2O15127 329 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 ZNF208O43345 1280 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 PEX11AO75192 247 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 HPXP02790 462 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 GSNP06396 782 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 LAMP1P11279 417 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 ADRA2CP18825 462 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 RPL3P39023 403 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 RPL14P50914 215 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 MAP2K6P52564 334 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 GTF2A1P52655 376 aaPredicted RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 SH3BGRP55822 239 aaPredicted RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 RPL38P63173 70 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 MRPS11P82912 194 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 LSM12Q3MHD2 195 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 MAVSQ7Z434 540 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 GPAT4Q86UL3 456 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 MYPOPQ86VE0 399 aaPredicted RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 ZNF781Q8N8C0 355 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 IL17RDQ8NFM7 739 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 OR7A2PQ8NGA2 310 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 OR2T11Q8NH01 316 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 STMN2Q93045 179 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 NELFAQ9H3P2 528 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 DCLRE1BQ9H816 532 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 TNFRSF12AQ9NP84 129 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 ZNF275Q9NSD4 429 aaPredicted RBP12.62□□□□□ -0.39
IFT20-211ENST00000580991 TMED7Q9Y3B3 224 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 CORINQ9Y5Q5 1042 aa12.62□□□□□ -0.39
IFT20-211ENST00000580991 SLC22A2O15244 555 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 HDAC3O15379 428 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 MPZL1O95297 269 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 BCKDHAP12694 445 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 ZFP36P26651 326 aaKnown RBP12.61□□□□□ -0.39
IFT20-211ENST00000580991 ARRB2P32121 409 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 ARR3P36575 388 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 IDH2P48735 452 aaKnown RBP12.61□□□□□ -0.39
IFT20-211ENST00000580991 MAPK14Q16539 360 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 CLEC6AQ6EIG7 209 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 KRT80Q6KB66 452 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 NET1Q7Z628 596 aaPredicted RBP12.61□□□□□ -0.39
IFT20-211ENST00000580991 NATD1Q8N6N6 113 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 OR5AK3PQ8NH89 298 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 CCDC28BQ9BUN5 200 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 ZNF416Q9BWM5 594 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 MRPL37Q9BZE1 423 aaKnown RBP12.61□□□□□ -0.39
IFT20-211ENST00000580991 ZNF350Q9GZX5 532 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 SERHL2Q9H4I8 314 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
IFT20-211ENST00000580991 NOX3Q9HBY0 568 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 EXOSC3Q9NQT5 275 aaKnown RBP12.61□□□□□ -0.39
IFT20-211ENST00000580991 MRGBPQ9NV56 204 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 ATAD3AQ9NVI7 634 aa12.61□□□□□ -0.39
IFT20-211ENST00000580991 TMEM72A0PK05 275 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 AQP7P3A6NL99 342 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 PLPP2O43688 288 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 BCAS1O75363 584 aaPredicted RBP12.6□□□□□ -0.39
IFT20-211ENST00000580991 PRSS23O95084 383 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 AKR7A3O95154 331 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 ANP32DO95626 131 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 C6orf47O95873 294 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 GPIP06744 558 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 NCF2P19878 526 aaPredicted RBP12.6□□□□□ -0.39
IFT20-211ENST00000580991 TCN1P20061 433 aaPredicted RBP12.6□□□□□ -0.39
IFT20-211ENST00000580991 MATN1P21941 496 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 NR4A1P22736 598 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 PRTN3P24158 256 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 SELENOPP49908 381 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 POLR2HP52434 150 aaKnown RBP12.6□□□□□ -0.39
IFT20-211ENST00000580991 RPS26P62854 115 aaKnown RBP12.6□□□□□ -0.39
IFT20-211ENST00000580991 IL13RA1P78552 427 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 NPRL3Q12980 569 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 TRMT5Q32P41 509 aaKnown RBP12.6□□□□□ -0.39
IFT20-211ENST00000580991 DCAF12L2Q5VW00 463 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 AP1ARQ63HQ0 302 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 TMEM225Q6GV28 225 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 LINGO2Q7L985 606 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 OLIG3Q7RTU3 272 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 C16orf62Q7Z3J2 963 aa12.6□□□□□ -0.39
IFT20-211ENST00000580991 RBM15BQ8NDT2 890 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms