RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 COL6A5A8TX70 2615 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 A0A0B4J2E0 115 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 A0A1B0GX12 115 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 VWC2LB2RUY7 222 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 M0R082 166 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 NDUFS8O00217 210 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 NR5A2O00482 541 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 TRAF3IP2O43734 574 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 CECR9P0C854 216 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 CBR1P16152 277 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 GRPRP30550 384 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 SERPINF1P36955 418 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 SCARB2Q14108 478 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 SQLEQ14534 574 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 GLIPR1L2Q4G1C9 344 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 SWT1Q5T5J6 900 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 TMEM123Q8N131 208 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 SCAIQ8N9R8 606 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 NUP37Q8NFH4 326 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 OR4F15Q8NGB8 312 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF417Q8TAU3 575 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 HTRA1Q92743 480 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 OR2M2Q96R28 347 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF607Q96SK3 696 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF587Q96SQ5 575 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 GPR35Q9HC97 309 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 FBXO9Q9UK97 447 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 CORINQ9Y5Q5 1042 aa14.97□□□□□ -0.01
VPS9D1-203ENST00000563798 EVPLLA8MZ36 301 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 B9A039 149 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 MS4A18H0YCH9 400 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 AKAP8O43823 692 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 TPST2O60704 377 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 SERPINB7O75635 380 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 SLC6A2P23975 617 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 SNRPD2P62316 118 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 ARF1P84077 181 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 C1DQ13901 141 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 ADIPOQQ15848 244 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 MS4A18Q3C1V0 323 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 AGKQ53H12 422 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 ARFGEF3Q5TH69 2177 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 PODNL1Q6PEZ8 512 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF627Q7L945 461 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 HIPK4Q8NE63 616 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 PIK3C3Q8NEB9 887 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 FBXO17Q96EF6 278 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 LRR1Q96L50 414 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 EPYCQ99645 322 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 KCNS3Q9BQ31 491 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 CPPED1Q9BRF8 314 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 PRR14Q9BWN1 585 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 PLK3Q9H4B4 646 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 RABEP2Q9H5N1 569 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 ZNF442Q9H7R0 627 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 TMEM27Q9HBJ8 222 aa14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 MYOZ1Q9NP98 299 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-203ENST00000563798 A0A096LPE4 126 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 A0A1W2PPZ6 126 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 FMO6PO60774 539 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 MFN2O95140 757 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 IFNA2P01563 188 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 BGLAPP02818 100 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 USF1P22415 310 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 CALCRP30988 508 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 ARR3P36575 388 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 PCBP3P57721 371 aaKnown RBP14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 RBBP4Q09028 425 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 OR1Q1Q15612 314 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 RUNDC3AQ59EK9 446 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 TTMPQ5BVD1 217 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 LINC00114Q6XXX2 140 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 GPR137CQ8N3F9 429 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 DPP10Q8N608 796 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 SORCS2Q96PQ0 1159 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 TMEM43Q9BTV4 400 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 CRLF2Q9HC73 371 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 FKBP7Q9Y680 259 aa14.95□□□□□ -0.02
VPS9D1-203ENST00000563798 YLPM1P49750 1951 aaKnown RBP14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 MXRA5Q9NR99 2828 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 ZNF99A8MXY4 864 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 HPRP00739 348 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 C8BP07358 591 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 OR4A8P0C604 315 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 PPOXP50336 477 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 PDLIM4P50479 330 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 RGS8P57771 180 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 TUBA1BP68363 451 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 TUBA4AP68366 448 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 HGFACQ04756 655 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 CEACAM16Q2WEN9 425 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 CHRFAM7AQ494W8 412 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 TUBA1AQ71U36 451 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 PTOV1Q86YD1 416 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 ARMC8Q8IUR7 673 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 UEVLDQ8IX04 471 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 C20orf196Q8IYI0 205 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 IL17RDQ8NFM7 739 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 TSPEARQ8WU66 669 aa14.94□□□□□ -0.02
VPS9D1-203ENST00000563798 ZNF837Q96EG3 531 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms