RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GAL3ST1Q99999 423 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 GATA5Q9BWX5 397 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 MS4A7Q9GZW8 240 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 GPR35Q9HC97 309 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 MID1IP1Q9NPA3 183 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 HINT3Q9NQE9 182 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 RRAGDQ9NQL2 400 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 EXOSC3Q9NQT5 275 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 BAIAP2L1Q9UHR4 511 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 ATP6V1HQ9UI12 483 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 DUSP13Q9UII6 198 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 FAF1Q9UNN5 650 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC35A3Q9Y2D2 325 aa6.52□□□□□ -1.37
HERPUD1-206ENST00000563343 A0A1W2PPW3 197 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 C5orf63A6NC05 138 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF99A8MXY4 864 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 FAAHO00519 579 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF500O60304 480 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC43A1O75387 559 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 VAMP5O95183 116 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 AK1P00568 194 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 IGHMP01871 453 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 GPIP06744 558 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 GUSBP08236 651 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 LAMP1P11279 417 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 HTR3AP46098 478 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 MAP2K6P52564 334 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 PLTPP55058 493 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 LOXL3P58215 753 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 SEC61A1P61619 476 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 RPS23P62266 143 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 TEKQ02763 1124 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 PAX2Q02962 417 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 PAX8Q06710 450 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 FAM189A2Q15884 450 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 GSG1Q2KHT4 349 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 DEFB112Q30KQ8 113 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 TRMT5Q32P41 509 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 PCGF3Q3KNV8 242 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 GLIPR1L2Q4G1C9 344 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 RFTN2Q52LD8 501 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 TEX35Q5T0J7 233 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 TMEM225Q6GV28 225 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 SYT10Q6XYQ8 523 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 FRRS1Q6ZNA5 592 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF771Q7L3S4 317 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF627Q7L945 461 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF584Q8IVC4 421 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 CMIPQ8IY22 773 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 PARP8Q8N3A8 854 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 OR7A2PQ8NGA2 310 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 OR5AK3PQ8NH89 298 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 SFXN5Q8TD22 340 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 DCAKDQ8WVC6 231 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 OIT3Q8WWZ8 545 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 OR5P2Q8WZ92 322 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 CNOT9Q92600 299 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 RAB1CQ92928 201 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 FUT8Q9BYC5 575 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 CHIAQ9BZP6 476 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC6A13Q9NSD5 602 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 C1orf109Q9NX04 203 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 TAAR3PQ9P1P4 343 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 B3GAT1Q9P2W7 334 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 SEC14L4Q9UDX3 406 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 RCE1Q9Y256 329 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 DNAH9Q9NYC9 4486 aa6.51□□□□□ -1.37
HERPUD1-206ENST00000563343 IGHV3OR16-10A0A075B7F0 116 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 PRAMEF27A3QJZ7 478 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 H0YL77 283 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 RAD51CO43502 376 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 FRS3O43559 492 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 FZD7O75084 574 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 UBOX5O94941 541 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 C6orf47O95873 294 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 IGHV2-70P01814 119 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 CHRM4P08173 479 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 ZNF250P15622 560 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 MAKP20794 623 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 ATP5F1P24539 256 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 CD80P33681 288 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC6A9P48067 706 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 CLDN17P56750 224 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 PIGFQ07326 219 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 NKPD1Q17RQ9 610 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 HFEQ30201 348 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 SPRNQ5BIV9 151 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 TMEM255AQ5JRV8 349 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 PRAMEF8Q5VWM4 474 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 PRAMEF7Q5VXH5 474 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 Q6YL49 198 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 HMGN2P46Q86SG4 172 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 TMEM123Q8N131 208 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 KDM8Q8N371 416 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 PAQR4Q8N4S7 273 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 ARFGAP2Q8N6H7 521 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 NOA1Q8NC60 698 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms