RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RPS10-NUDT3A0A1W2PQS6 291 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 ELOA3DA6NLF2 546 aaPredicted RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 GRXCR1A8MXD5 290 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 UPK3AO75631 287 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 SYPP08247 313 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 SDHAP31040 664 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 CDKN2AP42771 156 aaKnown RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 HTRA3P83110 453 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 ZNF267Q14586 743 aaPredicted RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 ELOA3BQ3SY89 546 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 KLHL26Q53HC5 615 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 TMEM69Q5SWH9 247 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 APOOLQ6UXV4 268 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 FAM122BQ7Z309 247 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 DND1Q8IYX4 353 aaKnown RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 ELOA3Q8NG57 546 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 OR6C4Q8NGE1 309 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 ZPLD1Q8TCW7 415 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 SLC37A2Q8TED4 501 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 TMPRSS13Q9BYE2 586 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 SLC25A18Q9H1K4 315 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 CCDC86Q9H6F5 360 aaKnown RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 METTL17Q9H7H0 456 aaPredicted RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 DTX4Q9Y2E6 619 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 OR10H1Q9Y4A9 318 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 GOLGA4Q13439 2230 aaKnown RBP11.94□□□□□ -0.5
USB1-207ENST00000563149 SCN2AQ99250 2005 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 IGKV1D-42A0A075B6H8 117 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 B8ZZF3 427 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 G3V3Q6 166 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 TGFBR3LH3BV60 316 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 PHYHO14832 338 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 MPC2O95563 127 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 ST6GAL1P15907 406 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 FAUP35544 74 aaKnown RBP11.93□□□□□ -0.5
USB1-207ENST00000563149 VEGFCP49767 419 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 SELENOPP49908 381 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 P2RX1P51575 399 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 RAP2BP61225 183 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 ZNF74Q16587 644 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 Q6ZTK2 550 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 ATG4DQ86TL0 474 aaPredicted RBP11.93□□□□□ -0.5
USB1-207ENST00000563149 CDC20BQ86Y33 519 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 MCATQ8IVS2 390 aaKnown RBP11.93□□□□□ -0.5
USB1-207ENST00000563149 FTMTQ8N4E7 242 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 C19orf47Q8N9M1 422 aaKnown RBP11.93□□□□□ -0.5
USB1-207ENST00000563149 OR4C3Q8NH37 302 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 MOSPD2Q8NHP6 518 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 ZNF417Q8TAU3 575 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 Q96M85 177 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 SMAD5Q99717 465 aaKnown RBP11.93□□□□□ -0.5
USB1-207ENST00000563149 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 OR10A5Q9H207 317 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 OR10A4Q9H209 315 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 C12orf10Q9HB07 376 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 FAM60AQ9NP50 221 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 KCNN3Q9UGI6 736 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 FLVCR2Q9UPI3 526 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 TMEM14AQ9Y6G1 99 aa11.93□□□□□ -0.5
USB1-207ENST00000563149 A0A0A6YYC8 382 aaPredicted RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 IDSB3KWA1 339 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 I3L1I5 382 aaPredicted RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 M0R233 179 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 ARPC1BO15143 372 aaKnown RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 CREBL2O60519 120 aaPredicted RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 NDUFB6O95139 128 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 NSA2O95478 260 aaKnown RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 CFPP27918 469 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 CTHP32929 405 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 TAS2R20P59543 309 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 CTXN1P60606 82 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 EGR3Q06889 387 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 ALG10Q5BKT4 473 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 FNDC7Q5VTL7 733 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 LIPNQ5VXI9 398 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 ZNF626Q68DY1 528 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 MTFR2Q6P444 385 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 LRRTM1Q86UE6 522 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 SDR16C5Q8N3Y7 309 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 MEIOBQ8N635 442 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 ZNF615Q8N8J6 731 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 C16orf52Q8NHV5 167 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 TAS2R8Q9NYW2 309 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 MRPL15Q9P015 296 aaKnown RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 KLK11Q9UBX7 282 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
USB1-207ENST00000563149 TICRRQ7Z2Z1 1910 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 TRBV5-7A0A0A0MS05 114 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 A0A1B0GVT2 93 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 ZSCAN5BA6NJL1 495 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 C10orf142B7Z368 130 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 PRAMEF26H0Y7S4 382 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 BLOC1S5-TXNDC5H3BN57 136 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 HRKO00198 91 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 HCRTR1O43613 425 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 ZNF254O75437 659 aa11.92□□□□□ -0.5
USB1-207ENST00000563149 GLSO94925 669 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms