RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 CBR1P16152 277 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 HTR2AP28223 471 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 GTF2E2P29084 291 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 CEACAM16Q2WEN9 425 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 ZCCHC24Q8N2G6 241 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 C10orf111Q8N326 155 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 SVOPLQ8N434 492 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 LSMEM1Q8N8F7 131 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 BBS10Q8TAM1 723 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 ZNF417Q8TAU3 575 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 TAAR8Q969N4 342 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 OR2M2Q96R28 347 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 ZNF587Q96SQ5 575 aaPredicted RBP14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 C19orf24Q9BVV8 132 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 ZNF442Q9H7R0 627 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 CRLF2Q9HC73 371 aa14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 MOV10Q9HCE1 1003 aaKnown RBP14.46□□□□□ -0.09
VPS9D1-AS1-201ENST00000562298 IGKV1D-42A0A075B6H8 117 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 IGHV2OR16-5A0A0B4J2B6 119 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TMEM129A0AVI4 362 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LRP5LA4QPB2 252 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 hCG_2039718K7EN88 272 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CLIC1O00299 241 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TRAF3IP2O43734 574 aaPredicted RBP14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SEC14L2O76054 403 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 STAMBPO95630 424 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 GRPRP30550 384 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SLC18A1P54219 525 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 FADDQ13158 208 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 PHYHD1Q5SRE7 291 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 FAM69AQ5T7M9 428 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CROCCP2Q86T23 111 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TMEM123Q8N131 208 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MIER2Q8N344 545 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 GPR137CQ8N3F9 429 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 DOK1Q99704 481 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 RAB1BQ9H0U4 201 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 C12orf10Q9HB07 376 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SLC25A37Q9NYZ2 338 aa14.45□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 A0A1B0GWA3 101 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 AIM2O14862 343 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TGFAP01135 160 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 DAOP14920 347 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ETS2P15036 469 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NPR2P20594 1047 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CBLP22681 906 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 GIFP27352 417 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 PRKAR1BP31321 381 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 IL2RGP31785 369 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NPRL3Q12980 569 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 C1DQ13901 141 aaKnown RBP14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SPATA21Q7Z572 469 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MDP1Q86V88 176 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MSRB3Q8IXL7 192 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CDK20Q8IZL9 346 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ZNF540Q8NDQ6 660 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SLC38A4Q969I6 547 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 KLHL14Q9P2G3 628 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 RPS6KB2Q9UBS0 482 aa14.44□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TRAV36DV7A0A075B6V5 113 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LOC102725191A0A1B0GVB3 256 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ZNF99A8MXY4 864 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 C5orf58C9J3I9 102 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MS4A18H0YCH9 400 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 M0R3G1 203 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 OR2T1O43869 369 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TPST1O60507 370 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 HPRP00739 348 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 TACSTD2P09758 323 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 HLA-DOBP13765 273 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 HNF1AP20823 631 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ARR3P36575 388 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MS4A18Q3C1V0 323 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ALG10BQ5I7T1 473 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 C5orf46Q6UWT4 87 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 H1FNTQ75WM6 255 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 WDFY1Q8IWB7 410 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 PIK3C3Q8NEB9 887 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NFKBIDQ8NI38 313 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NEU4Q8WWR8 484 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 RAD21L1Q9H4I0 556 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 NOX3Q9HBY0 568 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 B3GNT2Q9NY97 397 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SLAMF8Q9P0V8 285 aa14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 FBXO9Q9UK97 447 aaPredicted RBP14.43□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SH3PXD2BA1X283 911 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LILRA1O75019 489 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ARAFP10398 606 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CAPZA2P47755 286 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MAGOHP61326 146 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 IL1RL1Q01638 556 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 SNTB2Q13425 540 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 ADRM1Q16186 407 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 MSMPQ1L6U9 139 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CR1LQ2VPA4 569 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 LRIF1Q5T3J3 769 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 CARD17Q5XLA6 110 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 KRT80Q6KB66 452 aa14.42□□□□□ -0.1
VPS9D1-AS1-201ENST00000562298 DHRS4L2Q6PKH6 230 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms