RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TFB1MQ8WVM0 346 aaKnown RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 PSMG2Q969U7 264 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 ZNF317Q96PQ6 595 aaPredicted RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 SORT1Q99523 831 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 NAPGQ99747 312 aaPredicted RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 SYT15Q9BQS2 421 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 NDEL1Q9GZM8 345 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 GBA3Q9H227 469 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 NEUROG2Q9H2A3 272 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 GOLPH3Q9H4A6 298 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 PLCXD1Q9NUJ7 323 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 CCDC59Q9P031 241 aaKnown RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 SENP1Q9P0U3 644 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 SPRR3Q9UBC9 169 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 SMIM28A0A1B0GU29 152 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 A0A1B0GWB2 263 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 MPTX1A8MV57 137 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 DCTN6O00399 190 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ACOT8O14734 319 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ZBTB5O15062 677 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 XRCC2O43543 280 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 SLC19A2O60779 497 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 NIPSNAP2O75323 286 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 SCRG1O75711 98 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 GPX5O75715 221 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 CDK14O94921 469 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 PIGRP01833 764 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 FGGP02679 453 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ALPLP05186 524 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 HCKP08631 526 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 KRT16P08779 473 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 CT45A10P0DMU9 189 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 MGMTP16455 207 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 GNB3P16520 340 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 SLC2A5P22732 501 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 GSSP48637 474 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 GPM6AP51674 278 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 CRISP1P54107 249 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 GSCP56915 257 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 LINC01547P58512 204 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 ORC2Q13416 577 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 FHL1Q13642 323 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 SLC10A1Q14973 349 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ARL6IP1Q15041 203 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 SIX1Q15475 284 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 PSG3Q16557 428 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 MOGAT2Q3SYC2 334 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ADAMTSL4-AS1Q5T5F5 129 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 OR2G6Q5TZ20 316 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ZNF324BQ6AW86 544 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 TRIM40Q6P9F5 258 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 EMBQ6PCB8 327 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 SLC35D2Q76EJ3 337 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 LRRTM1Q86UE6 522 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 LRRC8AQ8IWT6 810 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 C17orf78Q8N4C9 275 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 FTMTQ8N4E7 242 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 TRAM1L1Q8N609 369 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 LINC00469Q8N7U9 141 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 OR4D6Q8NGJ1 314 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 CXorf40AQ8TE69 158 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 NTN5Q8WTR8 489 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 CACNG8Q8WXS5 425 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 TMEM190Q8WZ59 177 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 MYDGFQ969H8 173 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ISOC2Q96AB3 205 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 MRGPRFQ96AM1 343 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ECHDC3Q96DC8 303 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 ZNF778Q96MU6 729 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 MS4A4EQ96PG1 132 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 KCTD14Q9BQ13 255 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 MRPL45Q9BRJ2 306 aaKnown RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 BBS2Q9BXC9 721 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 FRMD8P1Q9BZ68 369 aaPredicted RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 RETNQ9HD89 108 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 VCX3AQ9NNX9 186 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 NRBP2Q9NSY0 501 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 GIN1Q9NXP7 522 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 PRODH2Q9UF12 536 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 KIF25Q9UIL4 384 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 YARS2Q9Y2Z4 477 aaKnown RBP3.08□□□□□ -1.92
TDP1-217ENST00000557782 CDH10Q9Y6N8 788 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 CDHR2Q9BYE9 1310 aa3.08□□□□□ -1.92
TDP1-217ENST00000557782 AQRO60306 1485 aaKnown RBP eCLIP3.08□□□□□ -1.922e-7■■■■□ 20.2
TDP1-217ENST00000557782 RLFQ13129 1914 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 SCN5AQ14524 2016 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 A0A1B0GUV1 79 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 A0A1W2PRF3 423 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 A0A1W2PRM7 423 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 PRSS37A4D1T9 235 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 TRPC5OSA6NMA1 111 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 RFXANKO14593 260 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 CALUO43852 315 aaPredicted RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 SNAP91O60641 907 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 CLIC3O95833 236 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 CD160O95971 181 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 IGHV2-5P01817 119 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 KLK3P07288 261 aaPredicted RBP3.07□□□□□ -1.92
TDP1-217ENST00000557782 PLA2G2AP14555 144 aa3.07□□□□□ -1.92
TDP1-217ENST00000557782 NQO2P16083 231 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms