RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	RBM4	Q9BWF3	364 aa	Known RBP	10.91	□□□□□ -0.66
SHMT2-223	ENST00000556689	NSRP1	Q9H0G5	558 aa	Known RBP	10.91	□□□□□ -0.66
SHMT2-223	ENST00000556689	RACGAP1	Q9H0H5	632 aa		10.91	□□□□□ -0.66
SHMT2-223	ENST00000556689	GPR35	Q9HC97	309 aa		10.91	□□□□□ -0.66
SHMT2-223	ENST00000556689	USP22	Q9UPT9	525 aa		10.91	□□□□□ -0.66
SHMT2-223	ENST00000556689	DYSF	O75923	2080 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	CDHR4	A6H8M9	788 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	CCDC154	A6NI56	674 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689		M0R233	179 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	FRS3	O43559	492 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	ZNF432	O94892	652 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	BPGM	P07738	259 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	SAG	P10523	405 aa	Predicted RBP	10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	TCN1	P20061	433 aa	Predicted RBP	10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	ACHE	P22303	614 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	S100A3	P33764	101 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	CAPZA2	P47755	286 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	HILS1	P60008	231 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	DPY19L1	Q2PZI1	675 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	SPANXN4	Q5MJ08	99 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	REP15	Q6BDI9	236 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	THSD4	Q6ZMP0	1018 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	MDP1	Q86V88	176 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	CARM1	Q86X55	608 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	GPR137C	Q8N3F9	429 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	TEX29	Q8N6K0	151 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	TRIML2	Q8N7C3	387 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	OR51F2	Q8NH61	342 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	MFSD8	Q8NHS3	518 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	STK35	Q8TDR2	534 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	MRPL24	Q96A35	216 aa	Known RBP	10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	SLC25A36	Q96CQ1	311 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	JMJD8	Q96S16	334 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	MRPL37	Q9BZE1	423 aa	Known RBP	10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	NARFL	Q9H6Q4	476 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	NOX3	Q9HBY0	568 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	TREM2	Q9NZC2	230 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	BTNL2	Q9UIR0	455 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689	RCE1	Q9Y256	329 aa		10.9	□□□□□ -0.66
SHMT2-223	ENST00000556689		A0A096LPI6	279 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	TRAV20	A0A0B4J274	112 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	WDR91	A4D1P6	747 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF503-AS2	A6NEH8	195 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	NPIPB7	O75200	414 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	AHSA1	O95433	338 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	HPX	P02790	462 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	SERPINE1	P05121	402 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	GAA	P10253	952 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	ANPEP	P15144	967 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	NCF2	P19878	526 aa	Predicted RBP	10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	ETV4	P43268	484 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	LIMS1	P48059	325 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	CLNS1A	P54105	237 aa	Known RBP	10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	CHI3L2	Q15782	390 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	PDCD2	Q16342	344 aa	Predicted RBP	10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	CEACAM16	Q2WEN9	425 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	LIN52	Q52LA3	116 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF621	Q6ZSS3	439 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	VRK2	Q86Y07	508 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	OR52P1P	Q8NH57	321 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF837	Q96EG3	531 aa	Predicted RBP	10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	MAGEB18	Q96M61	343 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	CCDC115	Q96NT0	180 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	OXGR1	Q96P68	337 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	PANX1	Q96RD7	426 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	NOX1	Q9Y5S8	564 aa		10.89	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF99	A8MXY4	864 aa	Predicted RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	FTCDNL1	E5RQL4	147 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689		E9PBE3	544 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	WNT9B	O14905	357 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	PPIH	O43447	177 aa	Known RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	PNMT	P11086	282 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	CD79A	P11912	226 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	EPHA1	P21709	976 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	GTF2E2	P29084	291 aa	Known RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	GLRX	P35754	106 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	MDH1	P40925	334 aa	Known RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	RPS5	P46782	204 aa	Known RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	ARFIP2	P53365	341 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	SEC24C	P53992	1094 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	MYBPC1	Q00872	1141 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	STX3	Q13277	289 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	C1D	Q13901	141 aa	Known RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	MSMP	Q1L6U9	139 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	TRMT5	Q32P41	509 aa	Known RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF311	Q5JNZ3	666 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	COX20	Q5RI15	118 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	PIK3C3	Q8NEB9	887 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	SYT3	Q9BQG1	590 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	B3GNT2	Q9NY97	397 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF232	Q9UNY5	417 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	TENM1	Q9UKZ4	2725 aa		10.88	□□□□□ -0.67
SHMT2-223	ENST00000556689	ITM2A	O43736	263 aa		10.87	□□□□□ -0.67
SHMT2-223	ENST00000556689	PNP	P00491	289 aa		10.87	□□□□□ -0.67
SHMT2-223	ENST00000556689	HLA-H	P01893	362 aa		10.87	□□□□□ -0.67
SHMT2-223	ENST00000556689	GSN	P06396	782 aa		10.87	□□□□□ -0.67
SHMT2-223	ENST00000556689	ZNF35	P13682	527 aa		10.87	□□□□□ -0.67
SHMT2-223	ENST00000556689	PRG2	P13727	222 aa		10.87	□□□□□ -0.67
SHMT2-223	ENST00000556689	ALDH3B1	P43353	468 aa		10.87	□□□□□ -0.67

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