RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TRAV26-1A0A087WT03 109 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 A0A0A6YYC8 382 aaPredicted RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 A0A0U1RQF3 1178 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TMEM269A0A1B0GVZ9 245 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 G3V3Y1 287 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 RPL36A-HNRNPH2H7BZ11 118 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 I3L1I5 382 aaPredicted RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 RFXAPO00287 272 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 SLC17A3O00476 420 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 UBFD1O14562 309 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 FABP7O15540 132 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 OR2T1O43869 369 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 KLK8O60259 260 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ATP6AP2O75787 350 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TOMM40O96008 361 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 OR8U9P0C7N5 309 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 PNMTP11086 282 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ENGP17813 658 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 SDC1P18827 310 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 FBLN1P23142 703 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 F2RP25116 425 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 HTR2AP28223 471 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 BSGP35613 385 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 AGTR2P50052 363 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 RAB7AP51149 207 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 RAB28P51157 221 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 NAPAP54920 295 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 AQP5P55064 265 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 RANP62826 216 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 HBA1P69905 142 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 PSG6Q00889 435 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 RAB32Q13637 225 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 SF3A2Q15428 464 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 HMGN3Q15651 99 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 NSDHLQ15738 373 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 PLPPR5Q32ZL2 321 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ZNF789Q5FWF6 425 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 XKR7Q5GH72 579 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 PRAMEF17Q5VTA0 474 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TMEM205Q6UW68 189 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 CDHR3Q6ZTQ4 885 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 DPY19L4Q7Z388 723 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 NUFIP2Q7Z417 695 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 H1FOOQ8IZA3 346 aaPredicted RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 CPXM2Q8N436 756 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TEX26Q8N6G2 289 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 REPS2Q8NFH8 660 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 OR2AK2Q8NG84 335 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 OR5M9Q8NGP3 310 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 M1APQ8TC57 530 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 RNASEH2CQ8TDP1 164 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 ADAMTS17Q8TE56 1095 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TOMM40LQ969M1 308 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 FAM46BQ96A09 425 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TADA1Q96BN2 335 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 COA7Q96BR5 231 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 YIPF6Q96EC8 236 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 SCRN2Q96FV2 425 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 P2RY11Q96G91 374 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 LMLNQ96KR4 655 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 AMDHD1Q96NU7 426 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 DGAT2Q96PD7 388 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TECTBQ96PL2 329 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 IL4I1Q96RQ9 567 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ASCL2Q99929 193 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 MARVELD1Q9BSK0 173 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 LRFN3Q9BTN0 628 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ALG12Q9BV10 488 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 C20orf85Q9H1P6 137 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 MED28Q9H204 178 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ABHD16BQ9H3Z7 469 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ZNF385DQ9H6B1 395 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 NOX3Q9HBY0 568 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 C2orf42Q9NWW7 574 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 DUS2Q9NX74 493 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 PLA2G3Q9NZ20 509 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 KCMF1Q9P0J7 381 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ZNF70Q9UC06 446 aaPredicted RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 MRM2Q9UI43 246 aaKnown RBP5.67□□□□□ -1.5
TDP1-215ENST00000556498 POMT2Q9UKY4 750 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 METP08581 1390 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 DISP3Q9P2K9 1392 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 ALKQ9UM73 1620 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ADAMTS13Q76LX8 1427 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ATP10DQ9P241 1426 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TBC1D3DA0A087WVF3 549 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 A0A087WWV3 80 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 SMCO3A2RU48 225 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 NPEPPSL1A6NEC2 478 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ARL5CA6NH57 179 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 OR5H14A6NHG9 310 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 TBC1D3LB9A6J9 549 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 ICOSLGO75144 302 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CA11O75493 328 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 BRI3O95415 125 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 MATN4O95460 622 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 CFIP05156 583 aa5.66□□□□□ -1.5
TDP1-215ENST00000556498 IL6RP08887 468 aaPredicted RBP5.66□□□□□ -1.5
TDP1-215ENST00000556498 OR5AC1P0C628 307 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms