RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SEC14L4Q9UDX3 406 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 TMEFF2Q9UIK5 374 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 FAM215AQ9Y5M1 114 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 CDH10Q9Y6N8 788 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 CHD6Q8TD26 2715 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 A0A1W2PRG6 482 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 NPIPB13A6NJU9 1138 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 ZNF716A6NP11 495 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 NPIPB4C9JG80 1138 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 SOCS2O14508 198 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 IDH3BO43837 385 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 IL2RAP01589 272 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 APEHP13798 732 aaKnown RBP11.11□□□□□ -0.63
SHMT2-221ENST00000555773 ZNF26P17031 533 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-221ENST00000555773 SLC6A6P31641 620 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 IL1RL1Q01638 556 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 LRRC36Q1X8D7 754 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 ANKRD34AQ69YU3 496 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 NHLRC1Q6VVB1 395 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 CREB3L2Q70SY1 520 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 LSRQ86X29 649 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-221ENST00000555773 UEVLDQ8IX04 471 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 OR9K2Q8NGE7 335 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 MOSPD2Q8NHP6 518 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 ABHD3Q8WU67 409 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-221ENST00000555773 RDH12Q96NR8 316 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 GPX7Q96SL4 187 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-221ENST00000555773 OR52D1Q9H346 318 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 BCO1Q9HAY6 547 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 TINAGQ9UJW2 476 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 GTF3C1Q12789 2109 aa11.11□□□□□ -0.63
SHMT2-221ENST00000555773 CFAP46Q8IYW2 2715 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 A0A1B0GUH1 482 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 C11orf98E9PRG8 122 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 H0YJX3 145 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 IMPA2O14732 288 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 ARPC3O15145 178 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 RAMP1O60894 148 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 PLGP00747 810 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-221ENST00000555773 TP53P04637 393 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-221ENST00000555773 CD14P08571 375 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 GLI4P10075 376 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 KLK2P20151 261 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 PEX2P28328 305 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-221ENST00000555773 RPL4P36578 427 aaKnown RBP11.1□□□□□ -0.63
SHMT2-221ENST00000555773 GIPRP48546 466 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 CRISP1P54107 249 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 PER3P56645 1201 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 FXYD6P3P58550 94 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 CTXN1P60606 82 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 MRPL49Q13405 166 aaKnown RBP11.1□□□□□ -0.63
SHMT2-221ENST00000555773 IGFBP7Q16270 282 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 RIPPLY2Q5TAB7 128 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 SEM1Q6ZVN7 128 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 KIF18BQ86Y91 864 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 KDM8Q8N371 416 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 C9orf106Q8NAJ2 232 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 OR52L1Q8NGH7 329 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 TEX47Q8TBZ9 253 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 FANK1Q8TC84 345 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 SAMD8Q96LT4 415 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 TEX12Q9BXU0 123 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 TXNIPQ9H3M7 391 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 NRIP3Q9NQ35 241 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 KLHL13Q9P2N7 655 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-221ENST00000555773 BAIAP2Q9UQB8 552 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 MEMO1Q9Y316 297 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 FLVCR1Q9Y5Y0 555 aa11.1□□□□□ -0.63
SHMT2-221ENST00000555773 HSPB2A8KAH6 182 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 H3BN98 237 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 AKAP8O43823 692 aaKnown RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 MITFO75030 526 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 SS18L1O75177 396 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 TXNDC12O95881 172 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 BCL10O95999 233 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 F13BP05160 661 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 HLA-DOBP13765 273 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 POU1F1P28069 291 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 PTDSS1P48651 473 aaKnown RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 DAP3P51398 398 aaKnown RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 POU3F1Q03052 451 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-221ENST00000555773 PMPCAQ10713 525 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 NPRL3Q12980 569 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 HSPB2Q16082 182 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 SLC36A3Q495N2 470 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 TMEM201Q5SNT2 666 aa11.09□□□□□ -0.63
SHMT2-221ENST00000555773 FAM205BPQ63HN1 556 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms